RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 GPX2P18283 190 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 CFL1P23528 166 aaKnown RBP4.61□□□□□ -1.67
SPTA1-209ENST00000498708 GATA3P23771 443 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ERFP50548 548 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PROK1P58294 105 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TAS2R41P59536 307 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PPP1CBP62140 327 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 LCN6P62502 163 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 SLC3A1Q07837 685 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 Q3ZCU0 254 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 DEFB121Q5J5C9 76 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 CASC10Q5T4H9 136 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 AADACL4Q5VUY2 407 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 BRD3OSQ6XYD6 125 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ATG16L2Q8NAA4 619 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 C11orf65Q8NCR3 313 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 C19orf18Q8NEA5 215 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 OR2Z1Q8NG97 314 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 OR52E2Q8NGJ4 325 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 LINC01006Q8NI28 216 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ENKURQ8TC29 256 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 SLC7A6Q92536 515 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 POP5Q969H6 163 aaKnown RBP4.61□□□□□ -1.67
SPTA1-209ENST00000498708 NABP1Q96AH0 204 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TAMM41Q96BW9 452 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 CMBLQ96DG6 245 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 SGTBQ96EQ0 304 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 MNTQ99583 582 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PRSS27Q9BQR3 290 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 MRPL13Q9BYD1 178 aaKnown RBP4.61□□□□□ -1.67
SPTA1-209ENST00000498708 OR2H1Q9GZK4 316 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 RERGLQ9H628 205 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 NANOGQ9H9S0 305 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 SIAEQ9HAT2 523 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PATZ1Q9HBE1 687 aaKnown RBP4.61□□□□□ -1.67
SPTA1-209ENST00000498708 VCX3AQ9NNX9 186 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 EMC7Q9NPA0 242 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 C20orf141Q9NUB4 165 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TMEM106BQ9NUM4 274 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 MRGBPQ9NV56 204 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 UGT2A1Q9Y4X1 527 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 INSIG2Q9Y5U4 225 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TRAV40A0A0B4J280 105 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 LOC105371267A0A1B0GV96 52 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CEACAM18A8MTB9 384 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 H0YL77 283 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 J3KRW8 73 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 L7N2F9 121 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ABHD16AO95870 558 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 NPPAP01160 153 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 IGHMP01871 453 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 MT-ND1P03886 318 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CRYBA1P05813 215 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 THRBP10828 461 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 IFI30P13284 250 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CD80P33681 288 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 YAP1P46937 504 aaKnown RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 OR1E2P47887 323 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 SLC6A9P48067 706 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 DAP3P51398 398 aaKnown RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ARHGDIAP52565 204 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CTXN1P60606 82 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 BTG1P62324 171 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 MRPS34P82930 218 aaKnown RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CD69Q07108 199 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 SF3A3Q12874 501 aaKnown RBP eCLIP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 PSG7Q13046 419 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 PIN1Q13526 163 aaPredicted RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 BLMHQ13867 455 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 NFYCQ13952 458 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ZMYND11Q15326 602 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 HIST3H3Q16695 136 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 MMEL1Q495T6 779 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ESCO2Q56NI9 601 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ALG10Q5BKT4 473 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 MTX3Q5HYI7 312 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 FAM201AQ5SY85 155 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 C10orf128Q5T292 105 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 MBNL2Q5VZF2 373 aaKnown RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CD276Q5ZPR3 534 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 SLC25A47Q6Q0C1 308 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 DLEU7Q6UYE1 221 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 Q6ZR03 302 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 DPPA2Q7Z7J5 298 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 PATL1Q86TB9 770 aaKnown RBP4.6□□□□□ -1.67
SPTA1-209ENST00000498708 SLC30A8Q8IWU4 369 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 CADM3Q8N126 398 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 PARP8Q8N3A8 854 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 SPICQ8N5J4 248 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 STPG3Q8N7X2 389 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 OR51A7Q8NH64 312 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 OR10A6Q8NH74 314 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 LRRC8CQ8TDW0 803 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 TMEM239Q8WW34 195 aa4.6□□□□□ -1.67
SPTA1-209ENST00000498708 PHF21AQ96BD5 680 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms