RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 NKX3-1Q99801 234 aaPredicted RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 EBF4Q9BQW3 602 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 SYT4Q9H2B2 425 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 KAT8Q9H7Z6 458 aaKnown RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 RAB18Q9NP72 206 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 NDUFAF1Q9Y375 327 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 A0A1B0GW55 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 A0A1B0GWJ7 208 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 PEX14O75381 377 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 LCATP04180 440 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 CD14P08571 375 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 KIR2DS4P43632 304 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 GPR4P46093 362 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 IDH3AP50213 366 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 CRYBA2P53672 197 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 SLC18A1P54219 525 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 EMX1Q04741 257 aaPredicted RBP9.55□□□□□ -0.88
CDK9-205ENST00000498339 CD69Q07108 199 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 IKZF1Q13422 519 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 MEP1BQ16820 701 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 C11orf91Q3C1V1 193 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 ANKDD1AQ495B1 522 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 LRRC23Q53EV4 343 aaPredicted RBP9.55□□□□□ -0.88
CDK9-205ENST00000498339 CORO6Q6QEF8 472 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
CDK9-205ENST00000498339 ZNF826PQ6ZT77 177 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 MREGQ8N565 214 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 TPD52L3Q96J77 140 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 PRRC1Q96M27 445 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 PITX2Q99697 317 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 SSX3Q99909 188 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 NPFFR1Q9GZQ6 430 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 SLC22A4Q9H015 551 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 FAM234AQ9H0X4 552 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 RHCGQ9UBD6 479 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
CDK9-205ENST00000498339 DNAH9Q9NYC9 4486 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.54□□□□□ -0.88
CDK9-205ENST00000498339 HTR3EA5X5Y0 456 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 GGT3PA6NGU5 568 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 SOCS2O14508 198 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 AHCYL1O43865 530 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 GMDSO60547 372 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 FCN3O75636 299 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 IFNA14P01570 189 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 CD28P10747 220 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 IGLL1P15814 213 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 GGT2P36268 569 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 YAP1P46937 504 aaKnown RBP9.54□□□□□ -0.88
CDK9-205ENST00000498339 MICBQ29980 383 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 TNFAIP8L3Q5GJ75 292 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 PGM2L1Q6PCE3 622 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 ZNF730Q6ZMV8 503 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 CCDC80Q76M96 950 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 SLC36A1Q7Z2H8 476 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 LINC00346Q8IVM7 164 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 FAM216BQ8N7L0 139 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 CCL13Q99616 98 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 CCDC28BQ9BUN5 200 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 RABEP2Q9H5N1 569 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 RANBP3Q9H6Z4 567 aaPredicted RBP9.54□□□□□ -0.88
CDK9-205ENST00000498339 MAB21L2Q9Y586 359 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 LHFPL6Q9Y693 200 aa9.54□□□□□ -0.88
CDK9-205ENST00000498339 LOC100653049A0A140TA62 436 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 A0A1W2PQ09 198 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 CD300LBA8K4G0 201 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 K7EIL1 84 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 IMPA2O14732 288 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 NDUFB3O43676 98 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 KRT34O76011 436 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 ACSM4P0C7M7 580 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 MZT1Q08AG7 82 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 TRAP1Q12931 704 aaKnown RBP9.53□□□□□ -0.88
CDK9-205ENST00000498339 TRAM2Q15035 370 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 LRRC75BQ2VPJ9 315 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
CDK9-205ENST00000498339 WDR38Q5JTN6 314 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 NCR3LG1Q68D85 454 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 CROCCP2Q86T23 111 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 NDUFA11Q86Y39 141 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 GCSAMQ8N6F7 178 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 SLC7A13Q8TCU3 470 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 ACOT11Q8WXI4 607 aaPredicted RBP9.53□□□□□ -0.88
CDK9-205ENST00000498339 RORBQ92753 470 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 ATF6BQ99941 703 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 FNDC11Q9BVV2 318 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 NUAK2Q9H093 628 aa9.53□□□□□ -0.88
CDK9-205ENST00000498339 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
CDK9-205ENST00000498339 KAAG1Q9UBP8 84 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms