RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TLE4Q04727 773 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 MRPL28Q13084 256 aaKnown RBP11.68□□□□□ -0.54
CPNE1-227ENST00000498056 DOC2BQ14184 412 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 HLXQ14774 488 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-227ENST00000498056 CDK5R1Q15078 307 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 SPHARQ15513 63 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 NEDD8Q15843 81 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF672Q499Z4 452 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-227ENST00000498056 RNLSQ5VYX0 342 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF787Q6DD87 383 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF367Q7RTV3 350 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 PRSS45Q7RTY3 260 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 CATSPERDQ86XM0 798 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 TSPAN14Q8NG11 270 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 OR5L1Q8NGL2 311 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 OR2G2Q8NGZ5 317 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 HAVCR2Q8TDQ0 301 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 FBXW5Q969U6 566 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 REEP6Q96HR9 211 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 COG8Q96MW5 612 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ACOT13Q9NPJ3 140 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 G6PC2Q9NQR9 355 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 LSM2Q9Y333 95 aaKnown RBP11.68□□□□□ -0.54
CPNE1-227ENST00000498056 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 A0A087WXM4 84 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 A0A1W2PPR1 153 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 A0A1W2PPW3 197 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 E7EQL1 145 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 CTAG2O75638 210 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 RPSAP08865 295 aaKnown RBP11.67□□□□□ -0.54
CPNE1-227ENST00000498056 PSMB9P28065 219 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 GLRXP35754 106 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 MPV17P39210 176 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 TAS2R43P59537 309 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 NANOS3P60323 173 aaKnown RBP11.67□□□□□ -0.54
CPNE1-227ENST00000498056 ALKBH1Q13686 389 aaKnown RBP11.67□□□□□ -0.54
CPNE1-227ENST00000498056 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 SPARTQ8N0X7 666 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF676Q8N7Q3 588 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 FCGR1BQ92637 280 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 PPP1R14AQ96A00 147 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 COMMD4Q9H0A8 199 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF442Q9H7R0 627 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 CISD1Q9NZ45 108 aaKnown RBP11.67□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 ST6GALNAC2Q9UJ37 374 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
CPNE1-227ENST00000498056 TRBV2A0A0J9YWF9 115 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 A0A1B0GVI7 797 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 P2RY10O00398 339 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 HS3ST1O14792 307 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 TIMM8AO60220 97 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 UBCP0CG48 685 aaKnown RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 TGM4P49221 684 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 FABP6P51161 128 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 KLF3P57682 345 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF92Q03936 586 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 EMX1Q04741 257 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 GK2Q14410 553 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 ADIPOQQ15848 244 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 PGAP1Q75T13 922 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 ELMOD2Q8IZ81 293 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF485Q8NCK3 441 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 OR51E1Q8TCB6 317 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 KLF14Q8TD94 323 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 MARS2Q96GW9 593 aaKnown RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 FAM71F1Q96KD3 344 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 MRPL37Q9BZE1 423 aaKnown RBP11.66□□□□□ -0.54
CPNE1-227ENST00000498056 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 OPA3Q9H6K4 179 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 GPR84Q9NQS5 396 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 FRRS1LQ9P0K9 344 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 DUSP13Q9UII6 198 aa11.66□□□□□ -0.54
CPNE1-227ENST00000498056 hCG_38984A0A1B0GV85 526 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 ACOD1A6NK06 481 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 TMEM212A6NML5 194 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 H3BSA7 217 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 CLPTM1O96005 669 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 OR4A8P0C604 315 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 SMIM18P0DKX4 95 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 MSMPQ1L6U9 139 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 ALKBH6Q3KRA9 238 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 FDX2Q6P4F2 183 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 RPL22L1Q6P5R6 122 aaKnown RBP11.65□□□□□ -0.54
CPNE1-227ENST00000498056 KCTD8Q6ZWB6 473 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms