RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 Q5W150 140 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 VTCN1Q7Z7D3 282 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 WDR86Q86TI4 376 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 LINC00523Q86TU6 105 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 CSGALNACT2Q8N6G5 542 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 FRZBQ92765 325 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 FLYWCH2Q96CP2 140 aaKnown RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 HAUS1Q96CS2 278 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RCN3Q96D15 328 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RNF157Q96PX1 679 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 SLIRPQ9GZT3 109 aaKnown RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 FANCEQ9HB96 536 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 ZDHHC4Q9NPG8 344 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 CYTL1Q9NRR1 136 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RHBDD3Q9Y3P4 386 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 ADGRA3Q8IWK6 1321 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 IGHV1-69DA0A0B4J2H0 117 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 TAAR5O14804 337 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 ZBTB5O15062 677 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 SIVA1O15304 175 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 SOCS1O15524 211 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 CHST10O43529 356 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 MPDU1O75352 247 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 TDP2O95551 362 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 HLA-DQA1P01909 254 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 ZNF688P0C7X2 276 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 PGA4P0DJD7 388 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 PGA3P0DJD8 388 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 PGA5P0DJD9 388 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 PPICP45877 212 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 SERPINB8P50452 374 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 BCAP31P51572 246 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 EIF4EBP1Q13541 118 aaPredicted RBP2.44□□□□□ -2.02
SMC4-225ENST00000497203 LINC00483Q53H64 154 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 MPV17L2Q567V2 206 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 HSP90AA4PQ58FG1 418 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 MRPL21Q7Z2W9 205 aaKnown RBP2.44□□□□□ -2.02
SMC4-225ENST00000497203 OR4K5Q8NGD3 323 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 OR10W1Q8NGF6 305 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 OR5T3Q8NGG3 340 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 PIH1D2Q8WWB5 315 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 ISOC2Q96AB3 205 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 SGTBQ96EQ0 304 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 TOLLIPQ9H0E2 274 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 OR52D1Q9H346 318 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 C1orf198Q9H425 327 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 TDRD3Q9H7E2 651 aaKnown RBP2.44□□□□□ -2.02
SMC4-225ENST00000497203 CYP3A43Q9HB55 503 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 RGS18Q9NS28 235 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 NECAP2Q9NVZ3 263 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 SLC17A7Q9P2U7 560 aa2.44□□□□□ -2.02
SMC4-225ENST00000497203 IGSF9BQ9UPX0 1349 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 PTPRTO14522 1441 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SLC22A20A6NK97 555 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 RAD1O60671 282 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 WISP3O95389 354 aaPredicted RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 DCNP07585 359 aaKnown RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 ADRA2AP08913 450 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 CD37P11049 281 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 PSMD4P55036 377 aaKnown RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 CLDN6P56747 220 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 TAS2R46P59540 309 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 RPL23P62829 140 aaKnown RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 CRADDP78560 199 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 CDK5Q00535 292 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SLC39A6Q13433 755 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 GABRA6Q16445 453 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SNRNP35Q16560 246 aaKnown RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 C5orf64Q2M2E5 130 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ZNF829Q3KNS6 432 aaPredicted RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 GCSAMLQ5JQS6 135 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ZNF684Q5T5D7 378 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 AP1ARQ63HQ0 302 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 TMEM205Q6UW68 189 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SLC16A13Q7RTY0 426 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ZNF695Q8IW36 515 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 WDFY1Q8IWB7 410 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ZNF321PQ8N8H1 164 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 C19orf18Q8NEA5 215 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 LILRB4Q8NHJ6 448 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 DYNLL2Q96FJ2 89 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ZNF488Q96MN9 340 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 TEAD3Q99594 435 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SPIN2AQ99865 258 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 SPIN2BQ9BPZ2 258 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 ADA2Q9NZK5 511 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 CHTOPQ9Y3Y2 248 aaKnown RBP2.43□□□□□ -2.02
SMC4-225ENST00000497203 HES2Q9Y543 173 aa2.43□□□□□ -2.02
SMC4-225ENST00000497203 IGKV1-8A0A0C4DH67 115 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 GOLGA8JA6NMD2 632 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 CENPXA8MT69 81 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 ZNF99A8MXY4 864 aaPredicted RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 ZNF701M0R085 212 aaPredicted RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 NMT2O60551 498 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 SLC16A7O60669 478 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 FOXH1O75593 365 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 SCELO95171 688 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms