RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 KBTBD8Q8NFY9 601 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 NEK7Q8TDX7 302 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 FOXRED1Q96CU9 486 aaPredicted RBP7.5□□□□□ -1.21
U2AF1-212ENST00000496462 C10orf35Q96D05 121 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 CMBLQ96DG6 245 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 CEP19Q96LK0 163 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 NMNAT2Q9BZQ4 307 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 PBOV1Q9GZY1 135 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ACOT13Q9NPJ3 140 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 PSORS1C1Q9UIG5 152 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 IGHV2OR16-5A0A0B4J2B6 119 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 TMEM129A0AVI4 362 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ATP5J2P56134 94 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 TNFAIP6P98066 277 aaPredicted RBP7.5□□□□□ -1.21
U2AF1-212ENST00000496462 HIST3H3Q16695 136 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ODF4Q2M2E3 257 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF773Q6PK81 442 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF627Q7L945 461 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 NLRC3Q7RTR2 1065 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF573Q86YE8 665 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 BBS1Q8NFJ9 593 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 SLC25A40Q8TBP6 338 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 C14orf79Q96F83 325 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 WNT5BQ9H1J7 359 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 CA10Q9NS85 328 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ERVK13-1Q9NX77 482 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF281Q9Y2X9 895 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 FUOMA2VDF0 154 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 TFP02787 698 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 CCR9P51686 369 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 GPR176Q14439 515 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZDHHC23Q8IYP9 409 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF611Q8N823 705 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 OR52I1Q8NGK6 324 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 ST7LQ8TDW4 575 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 PP6455Q8WZ26 134 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 GGHQ92820 318 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 SIGLEC11Q96RL6 698 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 NOX3Q9HBY0 568 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 JKAMPQ9P055 326 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 NUFIP1Q9UHK0 495 aaKnown RBP7.5□□□□□ -1.21
U2AF1-212ENST00000496462 LRP12Q9Y561 859 aa7.5□□□□□ -1.21
U2AF1-212ENST00000496462 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
U2AF1-212ENST00000496462 A0A1W2PQL4 384 aaPredicted RBP7.49□□□□□ -1.21
U2AF1-212ENST00000496462 RAF1P04049 648 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 CLUP10909 449 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 CD53P19397 219 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 PDLIM4P50479 330 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 ISL1P61371 349 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 BDH1Q02338 343 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 NUP37Q8NFH4 326 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 LAMP3Q9UQV4 416 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 EXOGQ9Y2C4 368 aaKnown RBP7.49□□□□□ -1.21
U2AF1-212ENST00000496462 A0A1W2PPH5 198 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 PSMD9O00233 223 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 WISP2O76076 250 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 MPZL1O95297 269 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 BMXP51813 675 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 ENDOGQ14249 297 aaKnown RBP7.49□□□□□ -1.21
U2AF1-212ENST00000496462 HSD17B12Q53GQ0 312 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 ARMCX4Q5H9R4 360 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 CLVS2Q5SYC1 327 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 MZT2AQ6P582 158 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 B3GLCTQ6Y288 498 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 FOXL2NBQ6ZUU3 175 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 RNF170Q96K19 258 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 SYT3Q9BQG1 590 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 CXXC4Q9H2H0 198 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 MARCH7Q9H992 704 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 MED12Q93074 2177 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 GTF3C1Q12789 2109 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 TESK1Q15569 626 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 YIF1BQ5BJH7 314 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 OR5AS1Q8N127 324 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 JAGN1Q8N5M9 183 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 BOLLQ8N9W6 283 aaKnown RBP7.49□□□□□ -1.21
U2AF1-212ENST00000496462 GATAD2BQ8WXI9 593 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 SAP30LQ9HAJ7 183 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 PIGLQ9Y2B2 252 aa7.49□□□□□ -1.21
U2AF1-212ENST00000496462 PNMA8CA0A1B0GUJ8 204 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 OR5B21A6NL26 309 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 TRAPPC2LH3BP13 241 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 CCRL2O00421 344 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SPRY3O43610 288 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SLC2A1P11166 492 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 THBS4P35443 961 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 PSMB10P40306 273 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SOX2P48431 317 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 TGM4P49221 684 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 EVX1P49640 407 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 MMP16P51512 607 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 GPR50Q13585 617 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 GUSBP1Q15486 140 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ZNF787Q6DD87 383 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 SERPINA12Q8IW75 414 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ERGIC1Q969X5 290 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 MGLLQ99685 303 aa7.48□□□□□ -1.21
U2AF1-212ENST00000496462 ADGRL4Q9HBW9 690 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms