RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 BPIFB2Q8N4F0 458 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 MREGQ8N565 214 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 JAGN1Q8N5M9 183 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 NATD1Q8N6N6 113 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 OR4D9Q8NGE8 314 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 OR4D6Q8NGJ1 314 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 TCP10LQ8TDR4 215 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 GTF2H4Q92759 462 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 FGGYQ96C11 551 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 CXorf40BQ96DE9 158 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 CHMP6Q96FZ7 201 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 FAHD2AQ96GK7 314 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 SMIM14Q96QK8 99 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 XPO6Q96QU8 1125 aaKnown RBP3.57□□□□□ -1.84
SF3B1-212ENST00000496458 CLCC1Q96S66 551 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 CHID1Q9BWS9 393 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 GLIPR2Q9H4G4 154 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 NHEJ1Q9H9Q4 299 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF331Q9NQX6 463 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-212ENST00000496458 DIABLOQ9NR28 239 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 BFARQ9NZS9 450 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 SLC17A7Q9P2U7 560 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 UVRAGQ9P2Y5 699 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 KIF25Q9UIL4 384 aa3.57□□□□□ -1.84
SF3B1-212ENST00000496458 MYH3P11055 1940 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 RAI1Q7Z5J4 1906 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ARFGEF1Q9Y6D6 1849 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 KIAA1551Q9HCM1 1747 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 NSG1A0A0A6YYJ2 146 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 FUOMA2VDF0 154 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 SIGLEC16A6NMB1 481 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 GOLGA8JA6NMD2 632 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 AIM2O14862 343 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CCNB2O95067 398 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 FARS2O95363 451 aaKnown RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 FADS2O95864 444 aaKnown RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 TIMP1P01033 207 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 HLA-HP01893 362 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 IFNW1P05000 195 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 PCCAP05165 728 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 SNRPAP09012 282 aaKnown RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 PMCHP20382 165 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CCNE1P24864 410 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 HOXA9P31269 272 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 SLC26A3P40879 764 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CSKP41240 450 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 NSG1P42857 185 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 OR2B6P58173 313 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 VBP1P61758 197 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 TSPAN5P62079 268 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CDC20Q12834 499 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 RGS21Q2M5E4 152 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 PTPN20Q4JDL3 420 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CDKL4Q5MAI5 379 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CLVS2Q5SYC1 327 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 TMPRSS11AQ6ZMR5 421 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 STAC2Q6ZMT1 411 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 LRRC74BQ6ZQY2 392 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 USP50Q70EL3 339 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 AKAP14Q86UN6 197 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF589Q86UQ0 364 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 PPP1R27Q86WC6 154 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF100Q8IYN0 542 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 IQCKQ8N0W5 287 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 KIR3DL3Q8N743 410 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF433Q8N7K0 673 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 SNX31Q8N9S9 440 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CATSPER1Q8NEC5 780 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 TTLQ8NG68 377 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 OR8J2Q8NGG1 315 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CA5BP1Q8WTZ4 195 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 MYDGFQ969H8 173 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CEP170P1Q96L14 293 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF641Q96N77 438 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-212ENST00000496458 BIRC8Q96P09 236 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ATP5SQ99766 215 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 MED10Q9BTT4 135 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 CALN1Q9BXU9 219 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 POTEKPQ9BYX7 375 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 OR2S2Q9NQN1 319 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 ZC4H2Q9NQZ6 224 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 SPRR3Q9UBC9 169 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 DNAJC12Q9UKB3 198 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 KLK12Q9UKR0 248 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 OARD1Q9Y530 152 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 LAMB2P55268 1798 aa3.56□□□□□ -1.84
SF3B1-212ENST00000496458 IGHV2-70DA0A0C4DH43 119 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 A0A1W2PQ67 120 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 K7ENP7 123 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 RAD51BO15315 384 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 RGS16O15492 202 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 COCHO43405 550 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ENTPD5O75356 428 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ZMPSTE24O75844 475 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 IFNA14P01570 189 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 RPN2P04844 631 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 OR8U8P0C7N1 319 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 BGNP21810 368 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms