RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SPTSSAQ969W0 71 aa11.96□□□□□ -0.49
SPTBN1-205ENST00000496323 APH1AQ96BI3 265 aa11.96□□□□□ -0.49
SPTBN1-205ENST00000496323 TAAR6Q96RI8 345 aa11.96□□□□□ -0.49
SPTBN1-205ENST00000496323 PRDM14Q9GZV8 571 aa11.96□□□□□ -0.49
SPTBN1-205ENST00000496323 MMP28Q9H239 520 aa11.96□□□□□ -0.49
SPTBN1-205ENST00000496323 TMEM272A0A1B0GTI8 110 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 CTDSPLO15194 276 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 LYRM1O43325 122 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 GSTZ1O43708 216 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 PDGFAP04085 211 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 BDKRB2P30411 391 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 MAP2K3P46734 347 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ECH1Q13011 328 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 STK11Q15831 433 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF57Q68EA5 555 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 RNF144BQ7Z419 303 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ADGRE4PQ86SQ3 457 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 JAGN1Q8N5M9 183 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 TMEM138Q9NPI0 162 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 A0A096LPE4 126 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF587BE7ETH6 402 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 GFRA3O60609 400 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 CTAG2O75638 210 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 PTHLHP12272 177 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF20P17024 532 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 AGTR1P30556 359 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 PCBD1P61457 104 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 TMEM69Q5SWH9 247 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 DRAM2Q6UX65 266 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 GLCCI1Q86VQ1 547 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 SIAH3Q8IW03 269 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 OR5AS1Q8N127 324 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZADH2Q8N4Q0 377 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 CNTD2Q9H8S5 307 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 RBFOX1Q9NWB1 397 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 WASF3Q9UPY6 502 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF175Q9Y473 711 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF407Q9C0G0 2248 aa11.95□□□□□ -0.5
SPTBN1-205ENST00000496323 K7EM74 188 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 APOC1P02654 83 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ARSBP15848 533 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 RAB3AP20336 220 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 MNDAP41218 407 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 INPP1P49441 399 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 Q6ZSR3 168 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 SGK3Q96BR1 496 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 SCNM1Q9BWG6 230 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 PRSS50Q9UI38 385 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 CIB4A0PJX0 185 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF503-AS2A6NEH8 195 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 AQP7O14520 342 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 KDM4BO94953 1096 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 FARS2O95363 451 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 HTR5AP47898 357 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 TAS2R20P59543 309 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 CD300CQ08708 224 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 FAPQ12884 760 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 GPR176Q14439 515 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF169Q14929 603 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF100Q8IYN0 542 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 FOXRED1Q96CU9 486 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 ZC3HAV1LQ96H79 300 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 C12orf49Q9H741 205 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 RABL2AQ9UBK7 228 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 UPB1Q9UBR1 384 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 RABL2BQ9UNT1 228 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 V9GYS6 101 aa11.94□□□□□ -0.5
SPTBN1-205ENST00000496323 IGKV1-9A0A0C4DH69 117 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 XRCC3O43542 346 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 SULT1B1O43704 296 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 DHRS3O75911 302 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 TPTEP56180 551 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 CARTPTQ16568 116 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 PABPC1L2AQ5JQF8 200 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 OR52H1Q8NGJ2 320 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 OR52I2Q8NH67 350 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 METTL17Q9H7H0 456 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 GP6Q9HCN6 339 aa11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 MYEF2Q9P2K5 600 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 NCOA6Q14686 2063 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-205ENST00000496323 ORC5O43913 435 aa11.92□□□□□ -0.5
SPTBN1-205ENST00000496323 HLA-HP01893 362 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms