RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 ATF6BQ99941 703 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 RBM4BQ9BQ04 359 aaKnown RBP12.44□□□□□ -0.42
NUP58-214ENST00000495460 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 CMTM6Q9NX76 183 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 MRPL15Q9P015 296 aaKnown RBP12.44□□□□□ -0.42
NUP58-214ENST00000495460 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 RNF114Q9Y508 228 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 KPTNQ9Y664 436 aa12.44□□□□□ -0.42
NUP58-214ENST00000495460 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 LOC100653049A0A140TA62 436 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 MDFIC2A0A1B0GVS7 189 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 C5orf63A6NC05 138 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 FAM20BO75063 409 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 KRT34O76011 436 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 LHBP01229 141 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 H1F0P07305 194 aaKnown RBP12.43□□□□□ -0.42
NUP58-214ENST00000495460 TROVE2P10155 538 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP58-214ENST00000495460 OTX1P32242 354 aaPredicted RBP12.43□□□□□ -0.42
NUP58-214ENST00000495460 TPTEP56180 551 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 FXYD6P3P58550 94 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 METTL11BQ5VVY1 283 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 C8orf82Q6P1X6 216 aaPredicted RBP12.43□□□□□ -0.42
NUP58-214ENST00000495460 SMARCD3Q6STE5 483 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 JAZF1Q86VZ6 243 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 MARCH7Q9H992 704 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 POLR1DQ9Y2S0 133 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 IER3IP1Q9Y5U9 82 aa12.43□□□□□ -0.42
NUP58-214ENST00000495460 SLC22A31A6NKX4 558 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 DCTN6O00399 190 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 TSPAN9O75954 239 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 ZNF682O95780 498 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 HLA-DPB1P04440 258 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 GGT2P36268 569 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 DDOSTP39656 456 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 SLC7A2P52569 658 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 LIPEQ05469 1076 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 RFX4Q33E94 735 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 C1orf122Q6ZSJ8 110 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 OR6V1Q8N148 313 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 BHLHE23Q8NDY6 225 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 SPRYD4Q8WW59 207 aaPredicted RBP12.42□□□□□ -0.42
NUP58-214ENST00000495460 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
NUP58-214ENST00000495460 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
NUP58-214ENST00000495460 HSH2DQ96JZ2 352 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 C7orf34Q96L11 122 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 PCGF1Q9BSM1 259 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 FUZQ9BT04 418 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
NUP58-214ENST00000495460 NDUFAF4Q9P032 175 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 AURKCQ9UQB9 309 aa12.42□□□□□ -0.42
NUP58-214ENST00000495460 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
NUP58-214ENST00000495460 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 CD300LBA8K4G0 201 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 SOCS2O14508 198 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 GPR137BO60478 399 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 SFTPBP07988 381 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 SMIM11AP58511 58 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 SRSF4Q08170 494 aaKnown RBP12.41□□□□□ -0.42
NUP58-214ENST00000495460 TRAP1Q12931 704 aaKnown RBP12.41□□□□□ -0.42
NUP58-214ENST00000495460 OR8G1Q15617 311 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 MPPED2Q15777 294 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 CDONQ4KMG0 1287 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 HDXQ7Z353 690 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 LY6G5BQ8NDX9 201 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 TAF15Q92804 592 aaKnown RBP eCLIP12.41□□□□□ -0.42
NUP58-214ENST00000495460 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 SLCO4A1Q96BD0 722 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 PITX2Q99697 317 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 RERGLQ9H628 205 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 CNTD2Q9H8S5 307 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 CTSZQ9UBR2 303 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
NUP58-214ENST00000495460 CAPN7Q9Y6W3 813 aa12.41□□□□□ -0.42
NUP58-214ENST00000495460 A0A1B0GVI7 797 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 F5H5K5 113 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 RENP00797 406 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 SERPINA1P01009 418 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 LCATP04180 440 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 MUC1P15941 1255 aaPredicted RBP12.4□□□□□ -0.42
NUP58-214ENST00000495460 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 DRAM2Q6UX65 266 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 C12orf43Q96C57 262 aaKnown RBP12.4□□□□□ -0.42
NUP58-214ENST00000495460 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 TECTBQ96PL2 329 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 EFCAB1Q9HAE3 211 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 RNPEPL1Q9HAU8 725 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
NUP58-214ENST00000495460 C14orf119Q9NWQ9 140 aa12.4□□□□□ -0.42
NUP58-214ENST00000495460 CD300AQ9UGN4 299 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms