RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF799Q96GE5 643 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 PYURFQ96I23 114 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 MAP6Q96JE9 813 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 TECTBQ96PL2 329 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 SLC22A4Q9H015 551 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 MMADHCQ9H3L0 296 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-203ENST00000494993 RNF7Q9UBF6 113 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 CTSZQ9UBR2 303 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 KCNG2Q9UJ96 466 aa18.36■□□□□ 0.53
HDDC3-203ENST00000494993 CD300LBA8K4G0 201 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDDC3-203ENST00000494993 KCNJ8Q15842 424 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 ZNF620Q6ZNG0 422 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 SPTSSAQ969W0 71 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 PCGF1Q9BSM1 259 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 ADAT1Q9BUB4 502 aaKnown RBP18.35■□□□□ 0.53
HDDC3-203ENST00000494993 MYLK2Q9H1R3 596 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 FN3KRPQ9HA64 309 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 NOX4Q9NPH5 578 aa18.35■□□□□ 0.53
HDDC3-203ENST00000494993 FAM181BA6NEQ2 426 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 LGALS8O00214 317 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 GMDSO60547 372 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 PTBP3O95758 552 aaKnown RBP18.34■□□□□ 0.53
HDDC3-203ENST00000494993 ZNF823P16415 610 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 PRDX6P30041 224 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 CFHR2P36980 270 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 IFNGR2P38484 337 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 SNAI3Q3KNW1 292 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 SLC35F1Q5T1Q4 408 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 CD276Q5ZPR3 534 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 RUSC1-AS1Q66K80 236 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 Q6YL49 198 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 ERVK-18Q9QC07 812 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 WNK1Q9H4A3 2382 aa18.34■□□□□ 0.53
HDDC3-203ENST00000494993 A0A1B0GUS0 222 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 P2RY10O00398 339 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 SFTPBP07988 381 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 RRM2P31350 389 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 PYCR1P32322 319 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 RPS27P42677 84 aaKnown RBP18.33■□□□□ 0.52
HDDC3-203ENST00000494993 ZNF92Q03936 586 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 TSPAN31Q12999 210 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 ZNF362Q5T0B9 420 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-203ENST00000494993 SFRP4Q6FHJ7 346 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-203ENST00000494993 BOLLQ8N9W6 283 aaKnown RBP18.33■□□□□ 0.52
HDDC3-203ENST00000494993 PLPP7Q8NBV4 271 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 OR2AE1Q8NHA4 323 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 GNPDA2Q8TDQ7 276 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 MCUR1Q96AQ8 359 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 MARCH7Q9H992 704 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 TNFRSF19Q9NS68 423 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 KIF17Q9P2E2 1029 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 MAGEL2Q9UJ55 1249 aa18.33■□□□□ 0.52
HDDC3-203ENST00000494993 GGT3PA6NGU5 568 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 ZNF879B4DU55 563 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 C3orf80F5H4A9 247 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 ADAM20O43506 726 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 FABP3P05413 133 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 LIPFP07098 398 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 MMP9P14780 707 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 ANOS1P23352 680 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 OTX1P32242 354 aaPredicted RBP18.32■□□□□ 0.52
HDDC3-203ENST00000494993 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 PGBD2Q6P3X8 592 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 FIP1L1Q6UN15 594 aaKnown RBP18.32■□□□□ 0.52
HDDC3-203ENST00000494993 TBX15Q96SF7 602 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 NSRP1Q9H0G5 558 aaKnown RBP18.32■□□□□ 0.52
HDDC3-203ENST00000494993 TRIM36Q9NQ86 728 aa18.32■□□□□ 0.52
HDDC3-203ENST00000494993 TVP23AA6NH52 213 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 TNFRSF13BO14836 293 aaPredicted RBP18.31■□□□□ 0.52
HDDC3-203ENST00000494993 TOX4O94842 621 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 KNG1P01042 644 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 CRYBA1P05813 215 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 HSD17B1P14061 328 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 RAG2P55895 527 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 DEFA6Q01524 100 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 OR8B8Q15620 311 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 GLYATL3Q5SZD4 288 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 DRAM2Q6UX65 266 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 TMEM86BQ8N661 226 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 CYB561A3Q8NBI2 242 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 PROKR2Q8NFJ6 384 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 OR4F5Q8NH21 305 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 WFDC12Q8WWY7 111 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 FAM71F1Q96KD3 344 aaPredicted RBP18.31■□□□□ 0.52
HDDC3-203ENST00000494993 DDOQ99489 341 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 ELAC2Q9BQ52 826 aaKnown RBP18.31■□□□□ 0.52
HDDC3-203ENST00000494993 CHIAQ9BZP6 476 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 EGLN3Q9H6Z9 239 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 BEX1Q9HBH7 125 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 SMURF1Q9HCE7 757 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 MRPL15Q9P015 296 aaKnown RBP18.31■□□□□ 0.52
HDDC3-203ENST00000494993 CDH10Q9Y6N8 788 aa18.31■□□□□ 0.52
HDDC3-203ENST00000494993 TGP01266 2768 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 TRAV38-1A0A0B4J264 116 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 CENPVL3A0A0U1RRI6 287 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 C5orf63A6NC05 138 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 OOEPA6NGQ2 149 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 NDUFA2O43678 99 aa18.3■□□□□ 0.52
HDDC3-203ENST00000494993 MELTFP08582 738 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms