RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 J3QRE1 110 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 IMPA2O14732 288 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 AIREO43918 545 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 IGHV3-13P01766 116 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF182P17025 639 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ACHEP22303 614 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CCNOP22674 350 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SLC2A5P22732 501 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 WNT4P56705 351 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ELFN2Q5R3F8 820 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF362Q5T0B9 420 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 LINC00299Q6ZSB3 139 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF101Q8IZC7 436 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 TAAR3PQ9P1P4 343 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 EIF3KQ9UBQ5 218 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CCDC182A6NF36 153 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 C17orf100A8MU93 164 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 LILRA1O75019 489 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 KHDRBS3O75525 346 aaKnown RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 NCR1O76036 304 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 HPXP02790 462 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 NAT2P11245 290 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 NOS3P29474 1203 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 ETV1P50549 477 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 LSM6P62312 80 aaKnown RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 POU4F2Q12837 409 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 CRMP1Q14194 572 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 MOGQ16653 247 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 TSTQ16762 297 aaKnown RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 PCGF3Q3KNV8 242 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 MBNL2Q5VZF2 373 aaKnown RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF774Q6NX45 483 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 GDPGP1Q6ZNW5 385 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 RFPL4BQ6ZWI9 263 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 GLB1L2Q8IW92 636 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 RDH5Q92781 318 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 HPS1Q92902 700 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 MARS2Q96GW9 593 aaKnown RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 ERMAPQ96PL5 475 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 SNX18Q96RF0 628 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 CHODLQ9H9P2 273 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 EMC7Q9NPA0 242 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 NDUFB11Q9NX14 153 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 NKIRAS2Q9NYR9 191 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.61
ERCC3-209ENST00000494464 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 IER3IP1Q9Y5U9 82 aa11.27□□□□□ -0.61
ERCC3-209ENST00000494464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■■■□ 20.4
ERCC3-209ENST00000494464 FAM183AA6NL82 134 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 DOK2O60496 412 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 SLC16A7O60669 478 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 MT-ND5P03915 603 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 LIMS3P0CW19 117 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 LIMS4P0CW20 117 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 HSMCR30P0CW71 290 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 GADD45AP24522 165 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 CRABP1P29762 137 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 NCS1P62166 190 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ACSM1Q08AH1 577 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 DOC2BQ14184 412 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 SSX1Q16384 188 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF718Q3SXZ3 478 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 CHRFAM7AQ494W8 412 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 SLC35F1Q5T1Q4 408 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 FAM166AQ6J272 317 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 DNM1P34Q6PK57 102 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 USP43Q70EL4 1123 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF485Q8NCK3 441 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 OR9Q1Q8NGQ5 310 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ABHD4Q8TB40 342 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 NDNFQ8TB73 568 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 TBC1D15Q8TC07 691 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 PTP4A1Q93096 173 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 MSI2Q96DH6 328 aaKnown RBP11.26□□□□□ -0.61
ERCC3-209ENST00000494464 HCAR1Q9BXC0 346 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ELOVL3Q9HB03 270 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 LPAR3Q9UBY5 353 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 ATPIF1Q9UII2 106 aa11.26□□□□□ -0.61
ERCC3-209ENST00000494464 COA3Q9Y2R0 106 aaPredicted RBP11.26□□□□□ -0.61
ERCC3-209ENST00000494464 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 SGCEO43556 437 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 LMX1BO60663 402 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 RP2O75695 350 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 CLPXO76031 633 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 GAAP10253 952 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 HIST1H1CP16403 213 aaKnown RBP11.25□□□□□ -0.61
ERCC3-209ENST00000494464 CPEP16870 476 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms