RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 BDH1Q02338 343 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 RUNX2Q13950 521 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 OCIAD2Q56VL3 154 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 SAMD13Q5VXD3 122 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 CPZQ66K79 652 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 PPP1R32Q7Z5V6 425 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF100Q8IYN0 542 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 C11orf42Q8N5U0 333 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 OR10K1Q8NGX5 313 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 OR4S2Q8NH73 311 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ASB13Q8WXK3 278 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 TEX37Q96LM6 180 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ARHGAP9Q9BRR9 750 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 DAPP1Q9UN19 280 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 DHRS12A0PJE2 317 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ALOX12BO75342 701 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 EEDO75530 441 aaKnown RBP10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ADAP1O75689 374 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 SCGB1D1O95968 90 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 TOMM40O96008 361 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ARG1P05089 322 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 C8orf89P0DMQ9 161 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 HKR1P10072 659 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 KITP10721 976 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 UROSP10746 265 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ARRB2P32121 409 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 BRS3P32247 399 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 RAB38P57729 211 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ZP1P60852 638 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 PSG6Q00889 435 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 OR5I1Q13606 314 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 TMEM244Q5VVB8 128 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
BRCA1-222ENST00000493919 LYG1Q8N1E2 194 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 BEST4Q8NFU0 473 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 OR11H7Q8NGC8 314 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 RNASEH2CQ8TDP1 164 aaKnown RBP10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ASB17Q8WXJ9 295 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 THAP4Q8WY91 577 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 PCSK5Q92824 1860 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 TSLPQ969D9 159 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 TOMM40LQ969M1 308 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 UPRTQ96BW1 309 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 POM121L2Q96KW2 1035 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 ACOT13Q9NPJ3 140 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 LANCL2Q9NS86 450 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 P4HTMQ9NXG6 502 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 AHSPQ9NZD4 102 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 COMMD3Q9UBI1 195 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 MRPS33Q9Y291 106 aaKnown RBP10.36□□□□□ -0.75
BRCA1-222ENST00000493919 CDH10Q9Y6N8 788 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 BSNQ9UPA5 3926 aa10.36□□□□□ -0.75
BRCA1-222ENST00000493919 CACNA1GO43497 2377 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 IGSF10Q6WRI0 2623 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMEM269A0A1B0GVZ9 245 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 A6NNC1 897 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 CCL25O15444 150 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 LYRM1O43325 122 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 IL7RP16871 459 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 RAB5AP20339 215 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 MAOAP21397 527 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 BSGP35613 385 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TSFMP43897 325 aaKnown RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 NSDHLQ15738 373 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 COMMD6Q7Z4G1 85 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 M1APQ8TC57 530 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMEM43Q9BTV4 400 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF395Q9H8N7 513 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 VPS29Q9UBQ0 182 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF346Q9UL40 294 aaKnown RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 IGHV3-20A0A0C4DH32 117 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 OR5H15A6NDH6 313 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 OR5H1A6NKK0 313 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 PHOX2AO14813 284 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMPRSS11DO60235 418 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 SCELO95171 688 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 KLK1P06870 262 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 SULT1A3P0DMM9 295 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 SULT1A4P0DMN0 295 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 DPP4P27487 766 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 BTG2P78543 158 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 ACSM2AQ08AH3 577 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 DAG1Q14118 895 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TBR1Q16650 682 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 PHYHD1Q5SRE7 291 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 ACSM2BQ68CK6 577 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 KIRREL2Q6UWL6 708 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMED4Q7Z7H5 227 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 OAFQ86UD1 273 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 MIER2Q8N344 545 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 CLEC1AQ8NC01 280 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMEM52Q8NDY8 209 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 GPX8Q8TED1 209 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TWIST2Q8WVJ9 160 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms