RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RADILQ96JH8 1075 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 C4orf45Q96LM5 186 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 OR51B6Q9H340 312 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 SP140LQ9H930 580 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 FAIMQ9NVQ4 179 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 SCOCQ9UIL1 159 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 LSM2Q9Y333 95 aaKnown RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 SPG11Q96JI7 2443 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 HEATR1Q9H583 2144 aaKnown RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 IGHV2OR16-5A0A0B4J2B6 119 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 PNMA8CA0A1B0GUJ8 204 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 E9PI62 339 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 CRYAAP02489 173 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 PTAFRP25105 342 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 CD40P25942 277 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 PTH2RP49190 550 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 TAS2R43P59537 309 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 HGFACQ04756 655 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 RSPO1Q2MKA7 263 aaPredicted RBP11.58□□□□□ -0.56
MSH6-208ENST00000493177 KRTAP27-1Q3LI81 207 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 ZNF672Q499Z4 452 aaPredicted RBP11.58□□□□□ -0.56
MSH6-208ENST00000493177 BCL2L15Q5TBC7 163 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 SLC22A25Q6T423 547 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 SEZ6L2Q6UXD5 910 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 NAA40Q86UY6 237 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 NEUROG1Q92886 237 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 TRMT61AQ96FX7 289 aaKnown RBP11.58□□□□□ -0.56
MSH6-208ENST00000493177 Q96MF0 132 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 FAM206AQ9NX38 181 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 OR52A1Q9UKL2 312 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 AKAP9Q99996 3911 aa11.58□□□□□ -0.56
MSH6-208ENST00000493177 F8P00451 2351 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 INMTO95050 263 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 CLPTM1O96005 669 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 PNPP00491 289 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 LALBAP00709 142 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 FAM157BP0CG42 384 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 CALCRP30988 508 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 OTX1P32242 354 aaPredicted RBP11.57□□□□□ -0.56
MSH6-208ENST00000493177 TGM4P49221 684 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 RGS6P49758 472 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ATP5J2P56134 94 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 SPOCK1Q08629 439 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ALKBH1Q13686 389 aaKnown RBP11.57□□□□□ -0.56
MSH6-208ENST00000493177 TIGD6Q17RP2 521 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ODF4Q2M2E3 257 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 GFOD2Q3B7J2 385 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 UBE2UQ5VVX9 321 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 RPL22L1Q6P5R6 122 aaKnown RBP11.57□□□□□ -0.56
MSH6-208ENST00000493177 COMMD2Q86X83 199 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 CATSPERDQ86XM0 798 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 OR2G2Q8NGZ5 317 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ABHD4Q8TB40 342 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 UFD1Q92890 307 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 MGLLQ99685 303 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 PBOV1Q9GZY1 135 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 OR10A2Q9H208 303 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 MOB1AQ9H8S9 216 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
MSH6-208ENST00000493177 SLC22A13Q9Y226 551 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 SPEF1Q9Y4P9 236 aa11.57□□□□□ -0.56
MSH6-208ENST00000493177 ACOD1A6NK06 481 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 SRSF10O75494 262 aaKnown RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 ZNF35P13682 527 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 FOSL1P15407 271 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 WNT5AP41221 380 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 MMP16P51512 607 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 NANOS3P60323 173 aaKnown RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 SLC3A1Q07837 685 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 DOC2BQ14184 412 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 CDK5R1Q15078 307 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 TSTQ16762 297 aaKnown RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 CCDC58Q4VC31 144 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 WDR38Q5JTN6 314 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 XAF1Q6GPH4 301 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 UNQ6126/PRO20091Q6UXV3 157 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 PRSS35Q8N3Z0 413 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 ZNF676Q8N7Q3 588 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 OR8B12Q8NGG6 310 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 MUL1Q969V5 352 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 PPP1R14AQ96A00 147 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 APOBEC3DQ96AK3 386 aaPredicted RBP11.56□□□□□ -0.56
MSH6-208ENST00000493177 C18orf12Q96KH6 178 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 C1QTNF5Q9BXJ0 243 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 GSX2Q9BZM3 304 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 ISYNA1Q9NPH2 558 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 G6PC2Q9NQR9 355 aa11.56□□□□□ -0.56
MSH6-208ENST00000493177 ATP23Q9Y6H3 246 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms