RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CFAP77Q6ZQR2 320 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 RASSF6Q6ZTQ3 369 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 RHOUQ7L0Q8 258 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 MOGAT3Q86VF5 341 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 PARP8Q8N3A8 854 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 FTMTQ8N4E7 242 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 FAM86B1Q8N7N1 296 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 SIGLECL1Q8N7X8 197 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 SDR9C7Q8NEX9 313 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ZNF420Q8TAQ5 688 aaPredicted RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 SLCO4A1Q96BD0 722 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 TMEM246Q9BRR3 403 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ZNF747Q9BV97 191 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 FAM107BQ9H098 131 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 TOR3AQ9H497 397 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 DCAF16Q9NXF7 216 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ERVK-18Q9QC07 812 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 RNF7Q9UBF6 113 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ZNF69Q9UC07 566 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 V9GYQ6 96 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 TGP01266 2768 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 GGT3PA6NGU5 568 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 DNAJC9-AS1A6NH13 148 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 CD300LBA8K4G0 201 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ZNF878C9JN71 531 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 BHLHE40O14503 412 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 TIPRLO75663 272 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 PTBP3O95758 552 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 PLATP00750 562 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 OTX1P32242 354 aaPredicted RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 CD80P33681 288 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 GRK5P34947 590 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 MAGEA2P43356 314 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ENTPD1P49961 510 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 SLC25A1P53007 311 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 RPL15P61313 204 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 SEC61A1P61619 476 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 RSPO1Q2MKA7 263 aaPredicted RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 FAM98BQ52LJ0 330 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ZNF362Q5T0B9 420 aaPredicted RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 WDR25Q64LD2 544 aaPredicted RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 PGBD2Q6P3X8 592 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 DEFB107AQ8IZN7 70 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 LNX2Q8N448 690 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 PNLDC1Q8NA58 520 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 OR2T33Q8NG76 320 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 C22orf15Q8WYQ4 148 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ITFG2Q969R8 447 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 DMRTB1Q96MA1 342 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 KCNJ15Q99712 375 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 NUDT16L1Q9BRJ7 211 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 COPS4Q9BT78 406 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ADAT1Q9BUB4 502 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 ZNF696Q9H7X3 374 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 REEP1Q9H902 201 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 ABCB9Q9NP78 766 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 NOX4Q9NPH5 578 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 PNRC2Q9NPJ4 139 aaKnown RBP7.32□□□□□ -1.24
NUP50-217ENST00000491860 ESM1Q9NQ30 184 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 TBC1D23Q9NUY8 699 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 LYVE1Q9Y5Y7 322 aa7.32□□□□□ -1.24
NUP50-217ENST00000491860 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 RIIAD1A6NNX1 92 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 ANKRD30BLA7E2S9 258 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 H0YL77 283 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 LGALS8O00214 317 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 P2RY10O00398 339 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 FAM20BO75063 409 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 GPANK1O95872 356 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 ECDO95905 644 aaPredicted RBP7.31□□□□□ -1.24
NUP50-217ENST00000491860 HLA-DPB1P04440 258 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 ZNF3P17036 446 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PAICSP22234 425 aaKnown RBP7.31□□□□□ -1.24
NUP50-217ENST00000491860 PSMB10P40306 273 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PAX2Q02962 417 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 MAB21L1Q13394 359 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PCK2Q16822 640 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PDLIM3Q53GG5 364 aaPredicted RBP7.31□□□□□ -1.24
NUP50-217ENST00000491860 CLEC12AQ5QGZ9 265 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PRR31Q5SQ13 230 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 SHFQ7M4L6 423 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 DCXRQ7Z4W1 244 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 DHFR2Q86XF0 187 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 TMEM86BQ8N661 226 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 OR52H1Q8NGJ2 320 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 DACT3Q96B18 629 aaPredicted RBP7.31□□□□□ -1.24
NUP50-217ENST00000491860 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 FAM71F1Q96KD3 344 aaPredicted RBP7.31□□□□□ -1.24
NUP50-217ENST00000491860 TSSK6Q9BXA6 273 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 TEX12Q9BXU0 123 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 DGCR6LQ9BY27 220 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 SLITRK2Q9H156 845 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 PRDM13Q9H4Q3 707 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 RGCCQ9H4X1 137 aa7.31□□□□□ -1.24
NUP50-217ENST00000491860 EGLN3Q9H6Z9 239 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms