RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 RPL36Q9Y3U8 105 aaKnown RBP12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 ARFGEF3Q5TH69 2177 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 F5H5K5 113 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 LMX1BO60663 402 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF254O75437 659 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 NGFP01138 241 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 HSD11B1P28845 292 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 DCTDP32321 178 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 GZMKP49863 264 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 PPOXP50336 477 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 CXCR4P61073 352 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 TAF13Q15543 124 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 MSMPQ1L6U9 139 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 CNIH3Q8TBE1 160 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 MARS2Q96GW9 593 aaKnown RBP12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR8B4Q96RC9 309 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 BEX2Q9BXY8 128 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 MROQ9BYG7 248 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 MYOZ1Q9NP98 299 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
CDC42SE1-205ENST00000491825 LOC390937A0A1W2PQ73 354 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 A0A1W2PQL4 384 aaPredicted RBP12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 PRR32B1ATL7 298 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 IGHA1P01876 353 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 LCKP06239 509 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 H2BFMP0C1H6 154 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 HCCSP53701 268 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 PSMA6P60900 246 aaKnown RBP12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 ERVS71-1P61550 626 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 SPATC1Q76KD6 591 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 PRSS45Q7RTY3 260 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 KRT77Q7Z794 578 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR10H4Q8NGA5 316 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 MSI2Q96DH6 328 aaKnown RBP12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 MRPL37Q9BZE1 423 aaKnown RBP12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR2J1Q9GZK6 312 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 BPESC1Q9GZL8 116 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR51B6Q9H340 312 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 SP140LQ9H930 580 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
CDC42SE1-205ENST00000491825 IRGMA1A4Y4 181 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 APOL3O95236 402 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 MYF6P23409 242 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 THBS2P35442 1172 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SLC6A9P48067 706 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 CX3CR1P49238 355 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 KLF3P57682 345 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 KRTAP24-1Q3LI83 254 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF718Q3SXZ3 478 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 KLHL22Q53GT1 634 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF684Q5T5D7 378 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 FBXW12Q6X9E4 464 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 OR52H1Q8NGJ2 320 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SYNPRQ8TBG9 265 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SLC25A40Q8TBP6 338 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 KLF14Q8TD94 323 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF184Q99676 751 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SOX7Q9BT81 388 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 JAM3Q9BX67 310 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SHARPINQ9H0F6 387 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 INPP5EQ9NRR6 644 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 SLCO1C1Q9NYB5 712 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 CGGBP1Q9UFW8 167 aaPredicted RBP12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 RAB26Q9ULW5 256 aa12.81□□□□□ -0.36
CDC42SE1-205ENST00000491825 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SULT1C4O75897 302 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 IGHV3-13P01766 116 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 LCATP04180 440 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 PIPP12273 146 aaPredicted RBP12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 GIFP27352 417 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 GCH1P30793 250 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 PRKXP51817 358 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 RIDAP52758 137 aaKnown RBP12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SELENOVP59797 346 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 ZNF85Q03923 595 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SNCBQ16143 134 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SPATA46Q5T0L3 261 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 LAIR2Q6ISS4 152 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 FAM166AQ6J272 317 aa12.8□□□□□ -0.36
CDC42SE1-205ENST00000491825 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms