RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KRT77Q7Z794 578 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 LINC00346Q8IVM7 164 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 PAQR4Q8N4S7 273 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 CPEB3Q8NE35 698 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 OR2T27Q8NH04 317 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 UBASH3BQ8TF42 649 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 C1orf159Q96HA4 380 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 POM121L2Q96KW2 1035 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF582Q96NG8 517 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 CNN2Q99439 309 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 COQ7Q99807 217 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 ATF6BQ99941 703 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 MROQ9BYG7 248 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 NIPAL2Q9H841 368 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 TBCCD1Q9NVR7 557 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 BLOC1S6Q9UL45 172 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 GRIP1Q9Y3R0 1128 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 COMMD3-BMI1R4GMX3 469 aa9.42□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF878C9JN71 531 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF670-ZNF695F2Z2N8 137 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 F5H5K5 113 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 J3QW42 95 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 WNT9BO14905 357 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 SYNGR3O43761 229 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF254O75437 659 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 NCR1O76036 304 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 FADS2O95864 444 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 MT-ND5P03915 603 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 LCKP06239 509 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 CCDC159P0C7I6 412 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 SLC2A5P22732 501 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 GCH1P30793 250 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 CDH15P55291 814 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 MALLQ13021 153 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ALKBH6Q3KRA9 238 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF718Q3SXZ3 478 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 LIPNQ5VXI9 398 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 KCTD20Q7Z5Y7 419 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 TIGD4Q8IY51 512 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 BBS1Q8NFJ9 593 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 OR51G2Q8NGK0 314 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 OTOSQ8NHW6 89 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNRF4Q8WWF5 429 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 YIPF5Q969M3 257 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 SLAMF6Q96DU3 332 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 KCNJ15Q99712 375 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 COPS4Q9BT78 406 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ABHD6Q9BV23 337 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 NARFLQ9H6Q4 476 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 CHCHD3Q9NX63 227 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 LHFPL6Q9Y693 200 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 TANC2Q9HCD6 1990 aa9.41□□□□□ -0.9
TMEM39A-211ENST00000491685 ENTPD6O75354 484 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ABHD16AO95870 558 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 SBK2P0C263 348 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 NAT2P11245 290 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 CCL2P13500 99 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ALOX5APP20292 161 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 COL8A2P25067 703 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ERVS71-1P61550 626 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ACTC1P68032 377 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ACTA1P68133 377 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 FAM209AQ5JX71 171 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 RBM48Q5RL73 367 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 RGS7BPQ6MZT1 257 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 DRAM2Q6UX65 266 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 BCDIN3DQ7Z5W3 292 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF283Q8N7M2 679 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 OR1J1Q8NGS3 322 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 SNX33Q8WV41 574 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 APOBEC3DQ96AK3 386 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 RNFT2Q96EX2 444 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 PLCXD1Q9NUJ7 323 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 DNAJC27Q9NZQ0 273 aa9.4□□□□□ -0.9
TMEM39A-211ENST00000491685 LOC100509620A0A075B734 347 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 A0A1W2PPW3 197 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 DAPL1A0PJW8 107 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 FAM157AC9JC47 383 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 SELENOFO60613 162 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 TNFAIP8O95379 198 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 CLPTM1O96005 669 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 LCATP04180 440 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 DCTDP32321 178 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 LIPAP38571 399 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 NAA10P41227 235 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 MAGEB1P43366 347 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 SLC6A9P48067 706 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 ISL1P61371 349 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 MRPS11P82912 194 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 EGR3Q06889 387 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 RAB40BQ12829 278 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 CDK5R2Q13319 367 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 OTPQ5XKR4 325 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms