RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 ELOVL7A1L3X0 281 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 XKRYO14609 159 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 DVL1O14640 695 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 VIMP08670 466 aaKnown RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 CA6P23280 308 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 KDELR2P33947 212 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 RPL4P36578 427 aaKnown RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 CDKN2AP42771 156 aaKnown RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 CFAP77Q6ZQR2 320 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 TMPRSS11FQ6ZWK6 438 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 GCSAMQ8N6F7 178 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 LY6G5BQ8NDX9 201 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 CFHR4Q92496 578 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 TPD52L3Q96J77 140 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 HDHD2Q9H0R4 259 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 PNRC2Q9NPJ4 139 aaKnown RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 NRIP3Q9NQ35 241 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 FBLN5Q9UBX5 448 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 RPUSD1Q9UJJ7 312 aaKnown RBP10.85□□□□□ -0.67
USF1-206ENST00000491629 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 FOXJ3Q9UPW0 622 aa10.85□□□□□ -0.67
USF1-206ENST00000491629 IGHV3OR15-7A0A075B7D8 119 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 OOEPA6NGQ2 149 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 RNASEK-C17orf49H0YIS7 233 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 SOCS2O14508 198 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 GPR37O15354 613 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 LHBP01229 141 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 SDHAP31040 664 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 EFNB2P52799 333 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 SELENOWP63302 87 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 KLRD1Q13241 179 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 HERPUD1Q15011 391 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 TRAM2Q15035 370 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 OR8B8Q15620 311 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 LRRC23Q53EV4 343 aaPredicted RBP10.84□□□□□ -0.67
USF1-206ENST00000491629 OXLD1Q5BKU9 147 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 MBOAT2Q6ZWT7 520 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 LINC00346Q8IVM7 164 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 PNKDQ8N490 385 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 Q8N7P7 452 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 C11orf44Q8N8P7 122 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 GJC3Q8NFK1 279 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 ACOT11Q8WXI4 607 aaPredicted RBP10.84□□□□□ -0.67
USF1-206ENST00000491629 LRTOMTQ8WZ04 291 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 ITPKCQ96DU7 683 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 HCAR1Q9BXC0 346 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 TOR3AQ9H497 397 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 CNTD2Q9H8S5 307 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 ADA2Q9NZK5 511 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 SIGLEC7Q9Y286 467 aa10.84□□□□□ -0.67
USF1-206ENST00000491629 A0A1W2PRD5 423 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 A0A1W2PRF3 423 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 A0A1W2PRM7 423 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 TGFBR2P37173 567 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 OR8G1Q15617 311 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 METAP1DQ6UB28 335 aaPredicted RBP10.83□□□□□ -0.68
USF1-206ENST00000491629 C1orf122Q6ZSJ8 110 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 C11orf53Q8IXP5 236 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 RNF113BQ8IZP6 322 aaKnown RBP10.83□□□□□ -0.68
USF1-206ENST00000491629 OR8J3Q8NGG0 315 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 C17orf50Q8WW18 174 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 TNFRSF14Q92956 283 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 FAM46AQ96IP4 442 aaKnown RBP10.83□□□□□ -0.68
USF1-206ENST00000491629 GPX7Q96SL4 187 aaPredicted RBP10.83□□□□□ -0.68
USF1-206ENST00000491629 FNDC11Q9BVV2 318 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 FN3KRPQ9HA64 309 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 SIRT7Q9NRC8 400 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 C1orf123Q9NWV4 160 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 KAAG1Q9UBP8 84 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 IER3IP1Q9Y5U9 82 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 KPTNQ9Y664 436 aa10.83□□□□□ -0.68
USF1-206ENST00000491629 TRAV38-1A0A0B4J264 116 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 CD300LBA8K4G0 201 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 F5H5K5 113 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
USF1-206ENST00000491629 TXNDC12O95881 172 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 FBP1P09467 338 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 AMY2BP19961 511 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 ZNF92Q03936 586 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 CYLC2Q14093 348 aaPredicted RBP10.82□□□□□ -0.68
USF1-206ENST00000491629 KCNJ8Q15842 424 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 SNAI3Q3KNW1 292 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 TEX36Q5VZQ5 186 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 ERICH5Q6P6B1 374 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 ZNF730Q6ZMV8 503 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 PGAP1Q75T13 922 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 REC114Q7Z4M0 266 aa10.82□□□□□ -0.68
USF1-206ENST00000491629 OR6V1Q8N148 313 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms