RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ATP6V1C2Q8NEY4 427 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 OR4K1Q8NGD4 311 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 OR9Q1Q8NGQ5 310 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 ARRDC2Q8TBH0 407 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 NEK7Q8TDX7 302 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 FAM222BQ8WU58 562 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 TSACCQ96A04 125 aaPredicted RBP4.14□□□□□ -1.75
RTN4-215ENST00000491592 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 IMP4Q96G21 291 aaKnown RBP4.14□□□□□ -1.75
RTN4-215ENST00000491592 TMEM80Q96HE8 168 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 TRIB3Q96RU7 358 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 METTL9Q9H1A3 318 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 CLMPQ9H6B4 373 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 Q9H8V8 135 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 PLSCR3Q9NRY6 295 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 CYSLTR2Q9NS75 346 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 DDIT4Q9NX09 232 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 VNN3Q9NY84 501 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 GLTPQ9NZD2 209 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 NUDT4Q9NZJ9 180 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 VAPAQ9P0L0 249 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 NUFIP1Q9UHK0 495 aaKnown RBP4.14□□□□□ -1.75
RTN4-215ENST00000491592 OPN4Q9UHM6 478 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 GLS2Q9UI32 602 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 DIMT1Q9UNQ2 313 aaKnown RBP4.14□□□□□ -1.75
RTN4-215ENST00000491592 NSG2Q9Y328 171 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 ZNF175Q9Y473 711 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 LOXL2Q9Y4K0 774 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 ASB4Q9Y574 426 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 LCTP09848 1927 aa4.14□□□□□ -1.75
RTN4-215ENST00000491592 BRCA1P38398 1863 aaKnown RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 TRBV9A0A0B4J1U6 114 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 A0A0G2JMP0 313 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 A0A1B0GVT2 93 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 LOC285095A0A1B0GVY8 99 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PRSS37A4D1T9 235 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 LRP5LA4QPB2 252 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PSMB11A5LHX3 300 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ZNF729A6NN14 1252 aaPredicted RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 B4DXG7 233 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PROB1E7EW31 1015 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 G3V3Y1 287 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 M0QXV9 152 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 DVL1O14640 695 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 SLC9A3R1O14745 358 aaPredicted RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 TIMM23O14925 209 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 CASKO14936 926 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 MYL12BO14950 172 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 SPINT2O43291 252 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 KRT33AO76009 404 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 SLC22A5O76082 557 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 WDPCPO95876 746 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 IFNA7P01567 189 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 HLA-DQB1P01920 261 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 SEMG1P04279 462 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 FGF1P05230 155 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 HLA-DQB2P05538 268 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 H2BFMP0C1H6 154 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ADORA3P0DMS8 318 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 KCNE1P15382 129 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 MYL12AP19105 171 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 NPR2P20594 1047 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 C4BPBP20851 252 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PPIBP23284 216 aaKnown RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 GLRA1P23415 457 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 S100A3P33764 101 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 SFTPDP35247 375 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 BRCC3P46736 316 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 RGRP47804 291 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 OMPP47874 163 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 TAF6P49848 677 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 LINC00205P59089 165 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 UBE2KP61086 200 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PSPHP78330 225 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PITX1P78337 314 aaPredicted RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 VLDLRP98155 873 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 EWSR1Q01844 656 aaKnown RBP eCLIP4.13□□□□□ -1.75
RTN4-215ENST00000491592 SP3Q02447 781 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 PAX2Q02962 417 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ST3GAL4Q11206 333 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 KLHL12Q53G59 568 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 HSD17B12Q53GQ0 312 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ZNF542PQ5EBM4 170 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 CARD16Q5EG05 197 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 GCSAMLQ5JQS6 135 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ELFN2Q5R3F8 820 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 FRG2Q64ET8 278 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 DMKNQ6E0U4 476 aaPredicted RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 PLET1Q6UQ28 207 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 ALKAL1Q6UXT8 129 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 UNQ6126/PRO20091Q6UXV3 157 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 FAM92BQ6ZTR7 304 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 MYPOPQ86VE0 399 aaPredicted RBP4.13□□□□□ -1.75
RTN4-215ENST00000491592 TMEM86AQ8N2M4 240 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 YIPF7Q8N8F6 280 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 OR6K2Q8NGY2 324 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 OR2T11Q8NH01 316 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 OR52E5Q8NH55 327 aa4.13□□□□□ -1.75
RTN4-215ENST00000491592 OR6X1Q8NH79 312 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms