RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CENPFP49454 3210 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 A0A0U1RQK1 487 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 TIMP1P01033 207 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 IFNA10P01566 189 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 NGFRP08138 427 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 DBHP09172 617 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 CTLA4P16410 223 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 IGFBP4P22692 258 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 ABCD3P28288 659 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 MRPS34P82930 218 aaKnown RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 HMGN3Q15651 99 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 RPUSD3Q6P087 351 aaKnown RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 ZNRF4Q8WWF5 429 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 ROBO4Q8WZ75 1007 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SLAMF6Q96DU3 332 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 COX14Q96I36 57 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OR5B12Q96R08 314 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 A8MVM7 634 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 HSPB6O14558 160 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 CRHP06850 196 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 CHRM2P08172 466 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 MFGE8Q08431 387 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SHEQ5VZ18 495 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 TCEAL6Q6IPX3 200 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 BAHD1Q8TBE0 780 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 FRZBQ92765 325 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SLC25A28Q96A46 364 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 DDIT4LQ96D03 193 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 PHYHIPLQ96FC7 376 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 AMELYQ99218 206 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 TOLLIPQ9H0E2 274 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 PRO1933Q9H354 126 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 SLC2A4RGQ9NR83 387 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 BRWD3Q6RI45 1802 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OR7C1O76099 320 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF205O95201 554 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
SHOX2-205ENST00000490689 VWA2Q5GFL6 755 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 RAET1LQ5VY80 246 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 TFAP2EQ6VUC0 442 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM123Q8N131 208 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OR13H1Q8NG92 308 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 NIPSNAP3BQ9BS92 247 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 PRRG4Q9BZD6 226 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 GPR84Q9NQS5 396 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 UFSP2Q9NUQ7 469 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 KIF26BQ2KJY2 2108 aa11.54□□□□□ -0.56
SHOX2-205ENST00000490689 OTOL1A6NHN0 477 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 DNASE2O00115 360 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 MBTPS2O43462 519 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 CA3P07451 260 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 DRD3P35462 400 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 GUK1Q16774 197 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 LILRA6Q6PI73 481 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZFP62Q8NB50 900 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 OR10D4PQ8NGN7 298 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 OR6S1Q8NH40 331 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 BORCS8Q96FH0 119 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZDHHC12Q96GR4 267 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 SGCZQ96LD1 299 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 NMNAT2Q9BZQ4 307 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 CNTD2Q9H8S5 307 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 DTX4Q9Y2E6 619 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 OR2M5A3KFT3 312 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZFP92A6NM28 416 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF705FA8MVS1 300 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF705DP0CH99 300 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF705BP0CI00 300 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF728P0DKX0 622 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 MYOGP15173 224 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF425Q6IV72 752 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 SLC22A25Q6T423 547 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF485Q8NCK3 441 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 SPPL3Q8TCT6 385 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF764Q96H86 408 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 GHRLQ9UBU3 117 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 VSIG4Q9Y279 399 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 FLVCR1Q9Y5Y0 555 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 R4GMQ9 66 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 RCC1P18754 421 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-205ENST00000490689 TGIF1Q15583 401 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 CD226Q15762 336 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 STT3BQ8TCJ2 826 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 ASB16Q96NS5 453 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 RAB33BQ9H082 229 aa11.53□□□□□ -0.56
SHOX2-205ENST00000490689 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms