RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PCYOX1LQ8NBM8 494 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 HDAC2Q92769 488 aaKnown RBP5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 RASD2Q96D21 266 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 LYZL4Q96KX0 146 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 CCL13Q99616 98 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 WFDC6Q9BQY6 131 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 ZMAT4Q9H898 229 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 SLCO1B3Q9NPD5 702 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 NANSQ9NR45 359 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 TMEM100Q9NV29 134 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 DCDC2Q9UHG0 476 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 SCOCQ9UIL1 159 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 BTNL2Q9UIR0 455 aa5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 ZNF256Q9Y2P7 627 aaPredicted RBP5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 UTP11Q9Y3A2 253 aaKnown RBP5.65□□□□□ -1.5
PDLIM1-203ENST00000490391 APOBP04114 4563 aaKnown RBP5.65□□□□□ -1.51
PDLIM1-203ENST00000490391 IGHV3OR15-7A0A075B7D8 119 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 OR6C6A6NF89 314 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 FAM90A8PA6NJQ4 464 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 DOK2O60496 412 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 CH25HO95992 272 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 DBHP09172 617 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 SELLP14151 372 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 BGNP21810 368 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 PAICSP22234 425 aaKnown RBP5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 MYF6P23409 242 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 ECHS1P30084 290 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 PRKAR1BP31321 381 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 MYCNOSP40205 109 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 TGM4P49221 684 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 CDH12P55289 794 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 OR1Q1Q15612 314 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 WDR38Q5JTN6 314 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 KCTD18Q6PI47 426 aaPredicted RBP5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 COLCA1Q6ZS62 124 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF826PQ6ZT77 177 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 CENPVQ7Z7K6 275 aaPredicted RBP5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 SATL1Q86VE3 508 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 C10orf107Q8IVU9 208 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 SPATA4Q8NEY3 305 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 OR51D1Q8NGF3 324 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 OR4X2Q8NGF9 303 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 AENQ8WTP8 325 aaKnown RBP5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF649Q9BS31 505 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 RMND5AQ9H871 391 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 BCL2L10Q9HD36 194 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF229Q9UJW7 825 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 SAR1BQ9Y6B6 198 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
PDLIM1-203ENST00000490391 GOLGA6L6A8MZA4 724 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 MCIDASD6RGH6 385 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 SGCEO43556 437 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 TPST1O60507 370 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 LYPD3O95274 346 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 FAM153BP0C7A2 387 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 CPA3P15088 417 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 MSR1P21757 451 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 PAFAH1B1P43034 410 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 DSTNP60981 165 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 RPL23AP62750 156 aaKnown RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 RPL18Q07020 188 aaKnown RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 CD47Q08722 323 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 MAD2L1Q13257 205 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 PCLAFQ15004 111 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 DPY19L1Q2PZI1 675 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 CCDC153Q494R4 210 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 LDLRAD2Q5SZI1 272 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 BEND6Q5SZJ8 279 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 HHATQ5VTY9 493 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF621Q6ZSS3 439 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 OR2W3Q7Z3T1 314 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 LHFPL4Q7Z7J7 247 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 EGFL6Q8IUX8 553 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 SLC30A8Q8IWU4 369 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 TRIML2Q8N7C3 387 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 SYT8Q8NBV8 401 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 OR52H1Q8NGJ2 320 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 AGR3Q8TD06 166 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 ACOT11Q8WXI4 607 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 PANX1Q96RD7 426 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 CPPED1Q9BRF8 314 aaPredicted RBP5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 RAB17Q9H0T7 212 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 WDR76Q9H967 626 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 EMC7Q9NPA0 242 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 POLE4Q9NR33 117 aa5.63□□□□□ -1.51
PDLIM1-203ENST00000490391 A0A1W2PRG6 482 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 GMNCA6NCL1 334 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 NPIPB13A6NJU9 1138 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 C12orf71A8MTZ7 269 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 NPIPB4C9JG80 1138 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 E9PBE3 544 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 PRR23D1E9PI22 279 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 ACOT8O14734 319 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 FMO6PO60774 539 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 KRT75O95678 551 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 HCKP08631 526 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 TSPAN19P0C672 248 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms