RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PRR23D2P0DMB1 279 aaPredicted RBP16.63■□□□□ 0.25
SMC4-222ENST00000490207 SLC2A1P11166 492 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 RASSF2P50749 326 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 GRB2P62993 217 aaKnown RBP16.63■□□□□ 0.25
SMC4-222ENST00000490207 GLYATL3Q5SZD4 288 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 DCAF12L2Q5VW00 463 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 DPY19L4Q7Z388 723 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 MOGAT3Q86VF5 341 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 RFLNBQ8N5W9 214 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 OR51V1Q9H2C8 321 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 METTL17Q9H7H0 456 aaPredicted RBP16.63■□□□□ 0.25
SMC4-222ENST00000490207 MARCH7Q9H992 704 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 IGHV3-64DA0A0J9YX35 117 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 C5orf63A6NC05 138 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 CD300LBA8K4G0 201 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 TIPRLO75663 272 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 CYB5R3P00387 301 aaPredicted RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 HMGN1P05114 100 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 HSD11B1P28845 292 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 MDH2P40926 338 aaKnown RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 SLC15A1P46059 708 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 CX3CR1P49238 355 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 RAD23AP54725 363 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 LCN2P80188 198 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 SRSF2Q01130 221 aaKnown RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 ZNF92Q03936 586 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 KRTAP24-1Q3LI83 254 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 PLBD1Q6P4A8 553 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 LRRC28Q86X40 367 aaPredicted RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 MUC20Q8N307 709 aaPredicted RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 TEX29Q8N6K0 151 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 DNAJC9Q8WXX5 260 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 ZMYND19Q96E35 227 aaPredicted RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 TMPRSS13Q9BYE2 586 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 TOR3AQ9H497 397 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 OPA3Q9H6K4 179 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 PATZ1Q9HBE1 687 aaKnown RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 METRNQ9UJH8 293 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 NOP16Q9Y3C1 178 aaKnown RBP16.62■□□□□ 0.25
SMC4-222ENST00000490207 N6AMT1Q9Y5N5 214 aa16.62■□□□□ 0.25
SMC4-222ENST00000490207 GGT3PA6NGU5 568 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 J3QLI3 93 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 XRCC2O43543 280 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 FOXH1O75593 365 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 CD200P41217 278 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 CDK5Q00535 292 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 ZNF181Q2M3W8 571 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 SHFQ7M4L6 423 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 TIGD4Q8IY51 512 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 NRBF2Q96F24 287 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 PLEKHA8Q96JA3 519 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 ADAT1Q9BUB4 502 aaKnown RBP16.61■□□□□ 0.25
SMC4-222ENST00000490207 ABHD6Q9BV23 337 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 TEX12Q9BXU0 123 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 NTN4Q9HB63 628 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 SLC25A19Q9HC21 320 aa16.61■□□□□ 0.25
SMC4-222ENST00000490207 LOC105371242A0A075B767 164 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 LRRC30A6NM36 301 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 F5H0A9 414 aaPredicted RBP16.6■□□□□ 0.25
SMC4-222ENST00000490207 PRODHO43272 600 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 TBX1O43435 398 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 TCF21O43680 179 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 SELENOFO60613 162 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 ATP5HO75947 161 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 ANXA2P07355 339 aaKnown RBP16.6■□□□□ 0.25
SMC4-222ENST00000490207 CA6P23280 308 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 GATA3P23771 443 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 GATA4P43694 442 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 SCGB2A2Q13296 93 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 OR8G1Q15617 311 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 KLHL12Q53G59 568 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 C1orf87Q8N0U7 546 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 CELF2-AS1Q8N7Q2 184 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 RNF133Q8WVZ7 376 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 UTP4Q969X6 686 aaKnown RBP16.6■□□□□ 0.25
SMC4-222ENST00000490207 REPIN1Q9BWE0 567 aaKnown RBP16.6■□□□□ 0.25
SMC4-222ENST00000490207 SLC22A4Q9H015 551 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 PAPOLBQ9NRJ5 636 aaKnown RBP16.6■□□□□ 0.25
SMC4-222ENST00000490207 ARHGAP32A7KAX9 2087 aa16.6■□□□□ 0.25
SMC4-222ENST00000490207 CEACAM18A8MTB9 384 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 AVPP01185 164 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 IRF2P14316 349 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 SEC61A1P61619 476 aaKnown RBP16.59■□□□□ 0.25
SMC4-222ENST00000490207 MAB21L1Q13394 359 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 PRAMEF6Q5VXH4 476 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 LIPNQ5VXI9 398 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 TMEM236Q5W0B7 351 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 C1orf229Q6ZS94 237 aaPredicted RBP16.59■□□□□ 0.25
SMC4-222ENST00000490207 CPOQ8IVL8 374 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 OR56B2PQ8NGI1 322 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 OR5K1Q8NHB7 308 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 AMELYQ99218 206 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 DNAJC27Q9NZQ0 273 aa16.59■□□□□ 0.25
SMC4-222ENST00000490207 MRPL15Q9P015 296 aaKnown RBP16.59■□□□□ 0.25
SMC4-222ENST00000490207 WNK2Q9Y3S1 2297 aa16.58■□□□□ 0.25
SMC4-222ENST00000490207 A8MXK9 166 aa16.58■□□□□ 0.24
SMC4-222ENST00000490207 ZNF205O95201 554 aa16.58■□□□□ 0.24
SMC4-222ENST00000490207 APOC1P02654 83 aa16.58■□□□□ 0.24
SMC4-222ENST00000490207 LYNP07948 512 aa16.58■□□□□ 0.24
SMC4-222ENST00000490207 ZFP36P26651 326 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms