RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DOC2BQ14184 412 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 TRAM2Q15035 370 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 ZBED5Q49AG3 693 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 GPR139Q6DWJ6 353 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 SLC35E4Q6ICL7 350 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 ERICH5Q6P6B1 374 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 Q6ZTK2 550 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 BTN2A1Q7KYR7 527 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 ADCK1Q86TW2 530 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 MICU2Q8IYU8 434 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 OR8J3Q8NGG0 315 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 OR5R1Q8NH85 324 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 MRAPQ8TCY5 172 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 ACOT11Q8WXI4 607 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 ZBTB9Q96C00 473 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 GPX7Q96SL4 187 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 SH3GL1Q99961 368 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 SYT4Q9H2B2 425 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 CNTD2Q9H8S5 307 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 WDR76Q9H967 626 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 NMNAT1Q9HAN9 279 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 NRIP3Q9NQ35 241 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 UFSP2Q9NUQ7 469 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 RPUSD1Q9UJJ7 312 aaKnown RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 COA3Q9Y2R0 106 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 FAM96BQ9Y3D0 163 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 A0A087WUU8 490 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 FXYD1O00168 92 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 DVL1O14640 695 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 OR10H3O60404 316 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 PPP1R3DO95685 299 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 LHBP01229 141 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 GABRA5P31644 462 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 KDELR2P33947 212 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 KIR2DS4P43632 304 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 SELENOWP63302 87 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 ECH1Q13011 328 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 CYLC2Q14093 348 aaPredicted RBP6.72□□□□□ -1.33
USP39-216ENST00000490193 OR8G1Q15617 311 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 OR8B8Q15620 311 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 CYBRD1Q53TN4 286 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 RABL3Q5HYI8 236 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 TEX36Q5VZQ5 186 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 OTPQ5XKR4 325 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 SFRP4Q6FHJ7 346 aaPredicted RBP6.72□□□□□ -1.33
USP39-216ENST00000490193 MBOAT2Q6ZWT7 520 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 PGAP1Q75T13 922 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 FAM90A1Q86YD7 464 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 GCSAMQ8N6F7 178 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 SPERTQ8NA61 448 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 ADAT1Q9BUB4 502 aaKnown RBP6.72□□□□□ -1.33
USP39-216ENST00000490193 NDEL1Q9GZM8 345 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 NUAK2Q9H093 628 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 SEMA6AQ9H2E6 1030 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP39-216ENST00000490193 NECAP2Q9NVZ3 263 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP39-216ENST00000490193 POLR1DQ9Y2S0 133 aa6.72□□□□□ -1.33
USP39-216ENST00000490193 V9GYY5 206 aaPredicted RBP6.72□□□□□ -1.33
USP39-216ENST00000490193 IGLV1-36A0A0B4J1U3 117 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 CD300LBA8K4G0 201 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 IMPA2O14732 288 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 FFAR1O14842 300 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 NPFFO15130 113 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 XPNPEP2O43895 674 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 PTP4A3O75365 173 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 NDUFB2O95178 105 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 TXNDC12O95881 172 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 NPPAP01160 153 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 GYPAP02724 150 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 CA6P23280 308 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 CRABP1P29762 137 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 GPR4P46093 362 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 ACSM1Q08AH1 577 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 MALLQ13021 153 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 LRRC23Q53EV4 343 aaPredicted RBP6.71□□□□□ -1.34
USP39-216ENST00000490193 COQ5Q5HYK3 327 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 VAX1Q5SQQ9 334 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 DNM1P34Q6PK57 102 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 PTCHD4Q6ZW05 846 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 PDZD9Q8IXQ8 264 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 Q8N7P7 452 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 SLC26A10Q8NG04 563 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 C8orf46Q8TAG6 207 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 SPRYD4Q8WW59 207 aaPredicted RBP6.71□□□□□ -1.34
USP39-216ENST00000490193 TNFRSF14Q92956 283 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 SLCO4A1Q96BD0 722 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 ATF6BQ99941 703 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 FNDC11Q9BVV2 318 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 ANKRD19PQ9H560 264 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 RANBP3Q9H6Z4 567 aaPredicted RBP6.71□□□□□ -1.34
USP39-216ENST00000490193 TMBIM4Q9HC24 238 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 PNRC2Q9NPJ4 139 aaKnown RBP6.71□□□□□ -1.34
USP39-216ENST00000490193 MRPL15Q9P015 296 aaKnown RBP6.71□□□□□ -1.34
USP39-216ENST00000490193 RPS6KA6Q9UK32 745 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 AURKCQ9UQB9 309 aa6.71□□□□□ -1.34
USP39-216ENST00000490193 SIGLEC7Q9Y286 467 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms