RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	DBH	P09172	617 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	GABRA1	P14867	456 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	GMFB	P60983	142 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	IL13RA1	P78552	427 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	RAET1L	Q5VY80	246 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	MARCH1	Q8TCQ1	289 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	MR1	Q95460	341 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	SIT1	Q9Y3P8	196 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	DNAJC13	O75165	2243 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF205	O95201	554 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	IFNA6	P05013	189 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ATP1B3	P54709	279 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	GABRE	P78334	506 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	BTN1A1	Q13410	526 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF260	Q3ZCT1	412 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	LYSMD4	Q5XG99	296 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	RABEPK	Q7Z6M1	372 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	MISP	Q8IVT2	679 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	STPG2	Q8N412	459 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	TMEM229B	Q8NBD8	167 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	OR5L2	Q8NGL0	311 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ANGPTL6	Q8NI99	470 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ROBO4	Q8WZ75	1007 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	MRGPRF	Q96AM1	343 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF837	Q96EG3	531 aa	Predicted RBP	13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF385A	Q96PM9	386 aa	Known RBP	13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	ST6GALNAC5	Q9BVH7	336 aa		13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	RBM24	Q9BX46	236 aa	Known RBP	13.91	□□□□□ -0.18
BRD9-208	ENST00000489816	HSPB2	A8KAH6	182 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	LDLRAD4	O15165	306 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	TRAF3IP2	O43734	574 aa	Predicted RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	CRTAP	O75718	401 aa	Predicted RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	STK17B	O94768	372 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	NPY4R	P50391	375 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	HSPB2	Q16082	182 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	SMUG1	Q53HV7	270 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	ELP2	Q6IA86	826 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	C1QL2	Q7Z5L3	287 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	ARMC10	Q8N2F6	343 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	MAFA	Q8NHW3	353 aa	Predicted RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	NUBPL	Q8TB37	319 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	PPP1R1C	Q8WVI7	109 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	OIT3	Q8WWZ8	545 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	MRPL13	Q9BYD1	178 aa	Known RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	TGIF2	Q9GZN2	237 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	CHRD	Q9H2X0	955 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	GAREM1	Q9H706	876 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	PTRH2	Q9Y3E5	179 aa	Known RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	LY6G6E	A0A0G2JKS1	128 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816		A0A1B0GTI1	187 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	OR5H15	A6NDH6	313 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	PGA4	P0DJD7	388 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	PGA3	P0DJD8	388 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	EPHA8	P29322	1005 aa	Predicted RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	MFSD13A	Q14CX5	517 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	UNQ6126/PRO20091	Q6UXV3	157 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816	ZNF416	Q9BWM5	594 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816		U3KQA8	63 aa		13.9	□□□□□ -0.18
BRD9-208	ENST00000489816		A0A0A6YYD4	124 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816		A0A1B0GTQ1	180 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	AQP8	O94778	261 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	ISG15	P05161	165 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	PATE4	P0C8F1	98 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	CX3CR1	P49238	355 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	PHYHD1	Q5SRE7	291 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	GALNTL5	Q7Z4T8	443 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	SLC22A24	Q8N4F4	322 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	OR2M3	Q8NG83	312 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	HLA-C	Q95604	372 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	SPACA9	Q96E40	222 aa	Predicted RBP	13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	UPB1	Q9UBR1	384 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	C5orf51	A6NDU8	294 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	CCL3	P10147	92 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	PNLIP	P16233	465 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	FST	P19883	344 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	MECP2	P51608	486 aa	Known RBP	13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	LUM	P51884	338 aa	Predicted RBP	13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	SCAND1	P57086	179 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	STARD6	P59095	220 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	ZP4	Q12836	540 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	C1orf100	Q5SVJ3	147 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	TMPPE	Q6ZT21	453 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	KMT5C	Q86Y97	462 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	BATF2	Q8N1L9	274 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	CCDC107	Q8WV48	283 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	THRSP	Q92748	146 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	MRGPRX4	Q96LA9	322 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	RAB22A	Q9UL26	194 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	IGLV3-12	A0A075B6K2	115 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	hCG_1807616	A0A1W2PRN6	198 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	PMS2P2	O95744	297 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	ARFRP1	Q13795	201 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	SLC9A3R2	Q15599	337 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	PLAC9	Q5JTB6	97 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	GLRX5	Q86SX6	157 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	NOXO1	Q8NFA2	376 aa		13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	ZNF471	Q9BX82	626 aa	Predicted RBP	13.89	□□□□□ -0.19
BRD9-208	ENST00000489816	OR14I1	A6ND48	311 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms