RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 OTOSQ8NHW6 89 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 RNF133Q8WVZ7 376 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TEAD3Q99594 435 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 CIB1Q99828 191 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 DNAJC27Q9NZQ0 273 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 LAMP5Q9UJQ1 280 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 PPP1R3CQ9UQK1 317 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ORC6Q9Y5N6 252 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 XRCC2O43543 280 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 PRKYO43930 277 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 SRP9P49458 86 aaKnown RBP11.34□□□□□ -0.59
CCL28-202ENST00000489442 CDH15P55291 814 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 ZNF92Q03936 586 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 CHRFAM7AQ494W8 412 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 SPRNQ5BIV9 151 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 SLX4IPQ5VYV7 408 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 RHOUQ7L0Q8 258 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 OR2AE1Q8NHA4 323 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 PKP2Q99959 881 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 RBM4BQ9BQ04 359 aaKnown RBP11.34□□□□□ -0.59
CCL28-202ENST00000489442 SLC30A2Q9BRI3 323 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 SOX7Q9BT81 388 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 OSBPL10Q9BXB5 764 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 BEX2Q9BXY8 128 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 SHARPINQ9H0F6 387 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 RIBC2Q9H4K1 309 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 BRD7Q9NPI1 651 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
CCL28-202ENST00000489442 B4DSR2 109 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 H0YL77 283 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 M0R129 80 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 WNT9BO14905 357 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 HLA-DPB1P04440 258 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 MRPL3P09001 348 aaKnown RBP11.33□□□□□ -0.6
CCL28-202ENST00000489442 ANPEPP15144 967 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 HNF1AP20823 631 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 SLC2A5P22732 501 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 EPHA2P29317 976 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 OR8G1Q15617 311 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 GFOD2Q3B7J2 385 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 GLYATL3Q5SZD4 288 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 FAM57BQ71RH2 274 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 SLC16A9Q7RTY1 509 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 KRT77Q7Z794 578 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 RAB39BQ96DA2 213 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 IL4I1Q96RQ9 567 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 AMELYQ99218 206 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
CCL28-202ENST00000489442 YIPF3Q9GZM5 350 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 SLC22A4Q9H015 551 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 TMEM106BQ9NUM4 274 aa11.33□□□□□ -0.6
CCL28-202ENST00000489442 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
CCL28-202ENST00000489442 NOP16Q9Y3C1 178 aaKnown RBP11.33□□□□□ -0.6
CCL28-202ENST00000489442 MXRA5Q9NR99 2828 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 ATRQ13535 2644 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 DOCK11Q5JSL3 2073 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 CD300LBA8K4G0 201 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 F5H5P2 479 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 SBK2P0C263 348 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 CA6P23280 308 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 OPRL1P41146 370 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 HCCSP53701 268 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 ZNF121P58317 390 aaPredicted RBP11.32□□□□□ -0.6
CCL28-202ENST00000489442 C12orf73Q69YU5 71 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 KCTD18Q6PI47 426 aaPredicted RBP11.32□□□□□ -0.6
CCL28-202ENST00000489442 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
CCL28-202ENST00000489442 ZNF771Q7L3S4 317 aaPredicted RBP11.32□□□□□ -0.6
CCL28-202ENST00000489442 OR52H1Q8NGJ2 320 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 PGAM5Q96HS1 289 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 OR10A2Q9H208 303 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 ZNF665Q9H7R5 613 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 TMEM160Q9NX00 188 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 LPAR3Q9UBY5 353 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 PCDHB10Q9UN67 800 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 TMEM14AQ9Y6G1 99 aa11.32□□□□□ -0.6
CCL28-202ENST00000489442 ANK3Q12955 4377 aaKnown RBP11.31□□□□□ -0.6
CCL28-202ENST00000489442 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 LRRC30A6NM36 301 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 H3BNX3 289 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 IFNL4K9M1U5 179 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 MLNRO43193 412 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 PCMT1P22061 227 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 CFL1P23528 166 aaKnown RBP11.31□□□□□ -0.6
CCL28-202ENST00000489442 POLR2IP36954 125 aaKnown RBP11.31□□□□□ -0.6
CCL28-202ENST00000489442 LMO4P61968 165 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms