RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DLX1P56177 255 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 NDUFV3P56181 108 aaKnown RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 DSCR9P59020 149 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 RAB14P61106 215 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 PPP1CBP62140 327 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 CKAP4Q07065 602 aaKnown RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C2orf54Q08AI8 447 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 PDIA2Q13087 525 aaKnown RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 NAB1Q13506 487 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 PDK2Q15119 407 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 POU2AF1Q16633 256 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 PDZD11Q5EBL8 140 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C19orf48Q6RUI8 117 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 CASP12Q6UXS9 341 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ZNF771Q7L3S4 317 aaPredicted RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 WDFY1Q8IWB7 410 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 BBS7Q8IWZ6 715 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 NRMQ8IXM6 262 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C10orf67Q8IYJ2 551 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ACBD4Q8NC06 268 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 NUP37Q8NFH4 326 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 OR10G3Q8NGC4 313 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 OR5B17Q8NGF7 314 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 OR52E2Q8NGJ4 325 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 OR10Z1Q8NGY1 313 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ZNF519Q8TB69 540 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 CREB3L1Q96BA8 519 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 SMIM19Q96E16 107 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 MED8Q96G25 268 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 PSMB7Q99436 277 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 GPR22Q99680 433 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 SH3GL3Q99963 347 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C20orf144Q9BQM9 153 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C1QTNF4Q9BXJ3 329 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 BARHL1Q9BZE3 327 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 MFSD1Q9H3U5 465 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 TMEM9BQ9NQ34 198 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 SPANXB1Q9NS25 103 aaPredicted RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 KCNIP1Q9NZI2 227 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 XCL2Q9UBD3 114 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ASF1AQ9Y294 204 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ZNF257Q9Y2Q1 563 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 WIF1Q9Y5W5 379 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 V9GY05 133 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ZFYVE9O95405 1425 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 C9orf84Q5VXU9 1444 aa2.65□□□□□ -1.99
PRPF4-203ENST00000488937 TCF20Q9UGU0 1960 aaKnown RBP2.65□□□□□ -1.99
PRPF4-203ENST00000488937 ANKRD30AQ9BXX3 1397 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 IGHV3OR16-13A0A075B7E8 117 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 IGHV3-16A0A0C4DH30 117 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 LOC105371267A0A1B0GV96 52 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 FAM166BA8MTA8 275 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 C21orf140B9A014 251 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TMEM238C9JI98 176 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 E5RI56 91 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 M0QZ92 97 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CTNSO60931 367 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 ZFAND5O76080 213 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 C6orf47O95873 294 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 IL6P05231 212 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CTSLP07711 333 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RPS17P08708 135 aaKnown RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 OR4E1P0C645 316 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CALM1P0DP23 149 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CALM2P0DP24 149 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CALM3P0DP25 149 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 THRAP10827 490 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 LAMP1P11279 417 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 LMO2P25791 158 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 PFN2P35080 140 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 SERPINB5P36952 375 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 GALR1P47211 349 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RND2P52198 227 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RIDAP52758 137 aaKnown RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 APOC4P55056 127 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 AP1S2P56377 157 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CLDN12P56749 244 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 ARPC4P59998 168 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RAB8AP61006 207 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RHOAP61586 193 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 RPL32P62910 135 aaKnown RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TWF1Q12792 350 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 STX4Q12846 297 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CLINT1Q14677 625 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TRAM1Q15629 374 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 SLC1A5Q15758 541 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 NRF1Q16656 503 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 LRRC26Q2I0M4 334 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TBC1D28Q2M2D7 210 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TTLL9Q3SXZ7 439 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 TMEM176BQ3YBM2 270 aaPredicted RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 PAGE3Q5JUK9 113 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 WDR74Q6RFH5 385 aaPredicted RBP2.64□□□□□ -1.99
PRPF4-203ENST00000488937 CXCL17Q6UXB2 119 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 Q6ZN92 141 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 PEX26Q7Z412 305 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 P2RY8Q86VZ1 359 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 GID4Q8IVV7 300 aa2.64□□□□□ -1.99
PRPF4-203ENST00000488937 BLIDQ8IZY5 108 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms