RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 BPIFB3P59826 476 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 MAP6Q96JE9 813 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 PCGF1Q9BSM1 259 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 SLC22A4Q9H015 551 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 FN3KRPQ9HA64 309 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 MRPL22Q9NWU5 206 aaKnown RBP15.31■□□□□ 0.04
HDAC6-231ENST00000488905 RNF7Q9UBF6 113 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 KCNG2Q9UJ96 466 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 IDH3BO43837 385 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 OR10H3O60404 316 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 CA6P23280 308 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 CFHR2P36980 270 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 KCNJ8Q15842 424 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 SNAI3Q3KNW1 292 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 RUSC1-AS1Q66K80 236 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF620Q6ZNG0 422 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 RNF148Q8N7C7 305 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 WFDC12Q8WWY7 111 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 CMTM5Q96DZ9 223 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 GORASP2Q9H8Y8 452 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 MARCH7Q9H992 704 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 NOX4Q9NPH5 578 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 TNFRSF19Q9NS68 423 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 ADA2Q9NZK5 511 aa15.3■□□□□ 0.04
HDAC6-231ENST00000488905 A0A1B0GUS0 222 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 CD300LBA8K4G0 201 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 C3orf80F5H4A9 247 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 LGALS8O00214 317 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 P2RY10O00398 339 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 PTBP3O95758 552 aaKnown RBP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 KNG1P01042 644 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 SFTPBP07988 381 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 MMP9P14780 707 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 ANOS1P23352 680 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 RPS27P42677 84 aaKnown RBP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 GSSP48637 474 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 RAG2P55895 527 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 DEFA6Q01524 100 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF92Q03936 586 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 PDLIM3Q53GG5 364 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF362Q5T0B9 420 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 CD276Q5ZPR3 534 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 FIP1L1Q6UN15 594 aaKnown RBP15.29■□□□□ 0.04
HDAC6-231ENST00000488905 Q6YL49 198 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 OR2AE1Q8NHA4 323 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 SPTSSAQ969W0 71 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 PYURFQ96I23 114 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 KIF17Q9P2E2 1029 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 ERVK-18Q9QC07 812 aa15.29■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF879B4DU55 563 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 GMDSO60547 372 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 OTX1P32242 354 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-231ENST00000488905 IFNGR2P38484 337 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 SFRP4Q6FHJ7 346 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-231ENST00000488905 TMEM86BQ8N661 226 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 BOLLQ8N9W6 283 aaKnown RBP15.28■□□□□ 0.04
HDAC6-231ENST00000488905 PLPP7Q8NBV4 271 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 OR4F5Q8NH21 305 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 TBX15Q96SF7 602 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 MYLK2Q9H1R3 596 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 BEX1Q9HBH7 125 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 SMURF1Q9HCE7 757 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 TRIM36Q9NQ86 728 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 MRPL15Q9P015 296 aaKnown RBP15.28■□□□□ 0.04
HDAC6-231ENST00000488905 MAGEL2Q9UJ55 1249 aa15.28■□□□□ 0.04
HDAC6-231ENST00000488905 OOEPA6NGQ2 149 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 GGT3PA6NGU5 568 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-231ENST00000488905 ADAM20O43506 726 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 TOX4O94842 621 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 FABP3P05413 133 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 CRYBA1P05813 215 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 LIPFP07098 398 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 MELTFP08582 738 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF823P16415 610 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 PRDX6P30041 224 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 RRM2P31350 389 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 PYCR1P32322 319 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 RELBQ01201 579 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 TSPAN31Q12999 210 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 OR8B8Q15620 311 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 GLYATL3Q5SZD4 288 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 SLC35F1Q5T1Q4 408 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 C17orf107Q6ZR85 190 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 KIR3DL3Q8N743 410 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 PROKR2Q8NFJ6 384 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 OR52L1Q8NGH7 329 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 GATAD2BQ8WXI9 593 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 MCUR1Q96AQ8 359 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 FAM71F1Q96KD3 344 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-231ENST00000488905 NSRP1Q9H0G5 558 aaKnown RBP15.27■□□□□ 0.04
HDAC6-231ENST00000488905 C1RLQ9NZP8 487 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 POMT1Q9Y6A1 747 aa15.27■□□□□ 0.04
HDAC6-231ENST00000488905 TRAV38-1A0A0B4J264 116 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 CENPVL3A0A0U1RRI6 287 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 NDUFA7O95182 113 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 PSKH1P11801 424 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms