RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
CLIC4-202ENST00000488683 PCED1AQ9H1Q7 454 aa11.23□□□□□ -0.61
CLIC4-202ENST00000488683 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
CLIC4-202ENST00000488683 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
CLIC4-202ENST00000488683 MEGF11A6BM72 1044 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 OR5H14A6NHG9 310 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 SSX5O60225 188 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 RAD51DO75771 328 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 CD74P04233 296 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 MELTFP08582 738 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 HSD11B1P28845 292 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF41P51814 821 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 EMP2P54851 167 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF121P58317 390 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF260Q3ZCT1 412 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM81Q6P7N7 255 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 BATF2Q8N1L9 274 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 OR1M1Q8NGA1 313 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 OR6S1Q8NH40 331 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 NUBPLQ8TB37 319 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 DNASE2BQ8WZ79 361 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 AQP3Q92482 292 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 GNRHR2Q96P88 292 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 SCPEP1Q9HB40 452 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 GPR84Q9NQS5 396 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 LHX6Q9UPM6 363 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 BOD1L1Q8NFC6 3051 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF208O43345 1280 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 HTR3BO95264 441 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 F10P00742 488 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ERCC1P07992 297 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 DHPSP49366 369 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 NPY4RP50391 375 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 QRFPP83859 136 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 SGCAQ16586 387 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PLPPR5Q32ZL2 321 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 GLIPR1L1Q6UWM5 242 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 OR8B12Q8NGG6 310 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PPP1R1CQ8WVI7 109 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM41AQ96HV5 264 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF581Q9P0T4 197 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 SRPK3Q9UPE1 567 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 OR14I1A6ND48 311 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 B3GALNT1O75752 331 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PMS2P2O95744 297 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PLATP00750 562 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 DBHP09172 617 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 P2RY4P51582 365 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 RNASE10Q5GAN6 216 aaKnown RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PLAC9Q5JTB6 97 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PHF19Q5T6S3 580 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 DEGS2Q6QHC5 323 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 KLHL24Q6TFL4 600 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 PLXDC2Q6UX71 529 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 RNF138Q8WVD3 245 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
CLIC4-202ENST00000488683 EDEM2Q9BV94 578 aa11.22□□□□□ -0.61
CLIC4-202ENST00000488683 ARPC4-TTLL3A0A0A6YYG9 625 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 A0A1B0GTI1 187 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 F5H5K5 113 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 QDPRP09417 244 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 C4BPBP20851 252 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 MPGP29372 298 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
CLIC4-202ENST00000488683 MPPED2Q15777 294 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 NKAIN3Q8N8D7 197 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 UCN2Q96RP3 112 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 B3GALT5Q9Y2C3 310 aa11.21□□□□□ -0.61
CLIC4-202ENST00000488683 OR5H15A6NDH6 313 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 NPIPB13A6NJU9 1138 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 NPIPB4C9JG80 1138 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 SIGLEC6O43699 453 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 ADAP1O75689 374 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 STK17BO94768 372 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 WDPCPO95876 746 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 HCKP08631 526 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 HOXD4P09016 255 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF17P17021 662 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 NUP62P37198 522 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 SUMO3P55854 103 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 RABEPKQ7Z6M1 372 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 SCARB1Q8WTV0 552 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 SPSB2Q99619 263 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 VRK1Q99986 396 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 SLC25A21Q9BQT8 299 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF471Q9BX82 626 aaPredicted RBP11.21□□□□□ -0.62
CLIC4-202ENST00000488683 IFT46Q9NQC8 304 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 MYOTQ9UBF9 498 aa11.21□□□□□ -0.62
CLIC4-202ENST00000488683 NUP50Q9UKX7 468 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms