RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 M0R129 80 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 IGHV2-5P01817 119 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SLC2A1P11166 492 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 EIF2B1Q14232 305 aaKnown RBP11.98□□□□□ -0.49
COL9A2-208ENST00000488463 KPNB1Q14974 876 aaKnown RBP11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SNAPC1Q16533 368 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 FAM120AOSQ5T036 256 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 C12orf73Q69YU5 71 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SPATC1Q76KD6 591 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 CXXC5Q7LFL8 322 aaKnown RBP11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SHFQ7M4L6 423 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 ZDHHC13Q8IUH4 622 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 BHLHE23Q8NDY6 225 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 PYDC1Q8WXC3 89 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 MEGF10Q96KG7 1140 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 ZNF582Q96NG8 517 aaPredicted RBP11.98□□□□□ -0.49
COL9A2-208ENST00000488463 CIB1Q99828 191 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 SEMA6AQ9H2E6 1030 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 GCM1Q9NP62 436 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 KRT84Q9NSB2 600 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 TVP23BQ9NYZ1 205 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 KCNS2Q9ULS6 477 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 OAZ3Q9UMX2 235 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 TENM1Q9UKZ4 2725 aa11.98□□□□□ -0.49
COL9A2-208ENST00000488463 CD300LBA8K4G0 201 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 PRR32B1ATL7 298 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 B4DSR2 109 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 E9PQ18 207 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 SELEP16581 610 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 ALOX5APP20292 161 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 POLR2IP36954 125 aaKnown RBP11.97□□□□□ -0.49
COL9A2-208ENST00000488463 PMELP40967 661 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 SLC6A9P48067 706 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 DVL1P1P54792 670 aaPredicted RBP11.97□□□□□ -0.49
COL9A2-208ENST00000488463 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
COL9A2-208ENST00000488463 MALLQ13021 153 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 MAB21L1Q13394 359 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 APOFQ13790 326 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 CHRFAM7AQ494W8 412 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 KLHL12Q53G59 568 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 AADACL4Q5VUY2 407 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
COL9A2-208ENST00000488463 TEAD3Q99594 435 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 PKP2Q99959 881 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 TOR3AQ9H497 397 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 ZNF665Q9H7R5 613 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 RRP15Q9Y3B9 282 aaKnown RBP11.97□□□□□ -0.49
COL9A2-208ENST00000488463 ANK2Q01484 3957 aa11.97□□□□□ -0.49
COL9A2-208ENST00000488463 F5H5P2 479 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 TMEM178BH3BS89 294 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.49
COL9A2-208ENST00000488463 FAM157CP0CG43 387 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 TNFSF4P23510 183 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.49
COL9A2-208ENST00000488463 GATA4P43694 442 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 SLC15A1P46059 708 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 CX3CR1P49238 355 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 MMP16P51512 607 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 HCCSP53701 268 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 RAD23AP54725 363 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 SLC3A1Q07837 685 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 CR1LQ2VPA4 569 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 RAB1CQ92928 201 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 SGK3Q96BR1 496 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 PLEKHA8Q96JA3 519 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 OSBPL10Q9BXB5 764 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 GABARAPL3Q9BY60 117 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 TMEM100Q9NV29 134 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 NPTNQ9Y639 398 aa11.96□□□□□ -0.49
COL9A2-208ENST00000488463 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 LYNP07948 512 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 MSMBP08118 114 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 CD200P41217 278 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 ZNF121P58317 390 aaPredicted RBP11.95□□□□□ -0.5
COL9A2-208ENST00000488463 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
COL9A2-208ENST00000488463 FAM3AP98173 230 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 ZMYND11Q15326 602 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 TAF13Q15543 124 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 SLC16A9Q7RTY1 509 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
COL9A2-208ENST00000488463 LRRC28Q86X40 367 aaPredicted RBP11.95□□□□□ -0.5
COL9A2-208ENST00000488463 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 ZNF420Q8TAQ5 688 aaPredicted RBP11.95□□□□□ -0.5
COL9A2-208ENST00000488463 TMEM163Q8TC26 289 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 TIMD4Q96H15 378 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 BEX2Q9BXY8 128 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 G6PC2Q9NQR9 355 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms