RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 FAM32AQ9Y421 112 aaKnown RBP5□□□□□ -1.61
CDHR3-213ENST00000488386 TANC2Q9HCD6 1990 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 IGHV1-69-2A0A0G2JMI3 117 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 A0A1W2PRQ8 180 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ISPDA4D126 451 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 TIMM8AO60220 97 aaPredicted RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 OR10H3O60404 316 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 KHDRBS3O75525 346 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 GADD45GO95257 159 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PTHP01270 115 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 IFNA2P01563 188 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PSKH1P11801 424 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SELEP16581 610 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 RHCEP18577 417 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ADRA2CP18825 462 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 GCH1P30793 250 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SRP14P37108 136 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF81P51508 661 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 MMP15P51511 669 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PSG7Q13046 419 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 DGCR6Q14129 220 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 KRT72Q14CN4 511 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF718Q3SXZ3 478 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 CLEC12AQ5QGZ9 265 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 LEG1Q6P5S2 330 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SMARCD3Q6STE5 483 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 Q6ZR03 302 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PIGWQ7Z7B1 504 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 RNF113BQ8IZP6 322 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PGAM4Q8N0Y7 254 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF540Q8NDQ6 660 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SDR9C7Q8NEX9 313 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 OR51L1Q8NGJ5 315 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 FANK1Q8TC84 345 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ZNRF4Q8WWF5 429 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 CCL17Q92583 94 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PYURFQ96I23 114 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 C4orf45Q96LM5 186 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SAMD8Q96LT4 415 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 NSMCE2Q96MF7 247 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 ERMAPQ96PL5 475 aaPredicted RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 NMNAT3Q96T66 252 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PLA2G12AQ9BZM1 189 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 BCL2L14Q9BZR8 327 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 LRMDAQ9H2I8 198 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 OR52D1Q9H346 318 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 C1orf198Q9H425 327 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 TOR3AQ9H497 397 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 EGLN3Q9H6Z9 239 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SAP30LQ9HAJ7 183 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SMURF2Q9HAU4 748 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 NRIP3Q9NQ35 241 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 DECR2Q9NUI1 292 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 HIF1ANQ9NWT6 349 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 VNN3Q9NY84 501 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SLCO1C1Q9NYB5 712 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PLEK2Q9NYT0 353 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 UBAP1Q9NZ09 502 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 STX18Q9P2W9 335 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 EIF3KQ9UBQ5 218 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 CD300AQ9UGN4 299 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 SAMD4AQ9UPU9 718 aaKnown RBP4.99□□□□□ -1.61
CDHR3-213ENST00000488386 POLR1DQ9Y2S0 133 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 STARD10Q9Y365 291 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 WIPI2Q9Y4P8 454 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 TIMM10BQ9Y5J6 103 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 DYSFO75923 2080 aa4.99□□□□□ -1.61
CDHR3-213ENST00000488386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.98□□□□□ -1.618e-9■□□□□ 8.6
CDHR3-213ENST00000488386 LOC105371242A0A075B767 164 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 C5orf63A6NC05 138 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 OR6C68A6NDL8 312 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 TVP23AA6NH52 213 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 NPIPB13A6NJU9 1138 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 F5H697 171 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 H0YL77 283 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 ATP8B1O43520 1251 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 SGCEO43556 437 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 ENTPD5O75356 428 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 GMNNO75496 209 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 IGHV3-13P01766 116 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 TFP02787 698 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 FABP3P05413 133 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 HSD17B1P14061 328 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 HIST1H1CP16403 213 aaKnown RBP4.98□□□□□ -1.61
CDHR3-213ENST00000488386 ITGA2P17301 1181 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 PYCR1P32322 319 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 GUCA1AP43080 201 aaPredicted RBP4.98□□□□□ -1.61
CDHR3-213ENST00000488386 SELENOVP59797 346 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 SEC61A1P61619 476 aaKnown RBP4.98□□□□□ -1.61
CDHR3-213ENST00000488386 LMO4P61968 165 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 BLOC1S1P78537 153 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 MS4A2Q01362 244 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 RFX4Q33E94 735 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 FAM205BPQ63HN1 556 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 FAHD2BQ6P2I3 314 aaPredicted RBP4.98□□□□□ -1.61
CDHR3-213ENST00000488386 PGBD2Q6P3X8 592 aa4.98□□□□□ -1.61
CDHR3-213ENST00000488386 DPY19L2P2Q6ZN68 376 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms