RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 METTL7AQ9H8H3 244 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 IGLV3-12A0A075B6K2 115 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 C9orf170A2RU37 121 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 SSX5O60225 188 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 ERCC1P07992 297 aaPredicted RBP15.92■□□□□ 0.14
VIM-206ENST00000487938 ZNF20P17024 532 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 KLK2P20151 261 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 VAMP1P23763 118 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 PTGDSP41222 190 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 TAGLNQ01995 201 aaKnown RBP15.92■□□□□ 0.14
VIM-206ENST00000487938 FGL1Q08830 312 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 GFOD2Q3B7J2 385 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 RABEPKQ7Z6M1 372 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 ZBTB44Q8NCP5 570 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 OR10R2Q8NGX6 335 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 OR2AJ1Q8NGZ0 328 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 VRK1Q99986 396 aaPredicted RBP15.92■□□□□ 0.14
VIM-206ENST00000487938 SHARPINQ9H0F6 387 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 ZNF319Q9P2F9 582 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 KLHL13Q9P2N7 655 aa15.92■□□□□ 0.14
VIM-206ENST00000487938 A0A0D9SG52 128 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 D6RAR5 112 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 RER1O15258 196 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 KCNAB3O43448 404 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 RAMP1O60894 148 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 SCRG1O75711 98 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 SFTPDP35247 375 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 LCN10Q6JVE6 187 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 JMJD6Q6NYC1 403 aaPredicted RBP15.91■□□□□ 0.14
VIM-206ENST00000487938 TMEM71Q6P5X7 295 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 OVCH2Q7RTZ1 564 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 ABHD12BQ7Z5M8 362 aaPredicted RBP15.91■□□□□ 0.14
VIM-206ENST00000487938 ZNF75AQ96N20 296 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 UQCC2Q9BRT2 126 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 SLC2A8Q9NY64 477 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 TNFSF18Q9UNG2 199 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 ADAMTS20P59510 1910 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 KRBOX1C9JBD0 128 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 PGA4P0DJD7 388 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 PGA3P0DJD8 388 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 ATF4P18848 351 aaPredicted RBP15.91■□□□□ 0.14
VIM-206ENST00000487938 LUMP51884 338 aaPredicted RBP15.91■□□□□ 0.14
VIM-206ENST00000487938 GPR85P60893 370 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 GLIPR1L1Q6UWM5 242 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 KCNRGQ8N5I3 272 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 TMEM104Q8NE00 496 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 PXT1Q8NFP0 134 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 FAM71F1Q96KD3 344 aaPredicted RBP15.91■□□□□ 0.14
VIM-206ENST00000487938 MRGPRX4Q96LA9 322 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 BANF2Q9H503 90 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 FN3KRPQ9HA64 309 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 ASH2LQ9UBL3 628 aa15.91■□□□□ 0.14
VIM-206ENST00000487938 A0A0A6YYD4 124 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 A0A1W2PNV4 684 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 KANTRA0A1W2PQU2 76 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 EEF1E1-BLOC1S5C9J1V9 151 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 SIGLEC5O15389 551 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 TPD52L2O43399 206 aaKnown RBP15.9■□□□□ 0.14
VIM-206ENST00000487938 IFNA6P05013 189 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 UBBP0CG47 229 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 ZNF121P58317 390 aaPredicted RBP15.9■□□□□ 0.14
VIM-206ENST00000487938 RPS27AP62979 156 aaKnown RBP15.9■□□□□ 0.14
VIM-206ENST00000487938 UBA52P62987 128 aaKnown RBP15.9■□□□□ 0.14
VIM-206ENST00000487938 DCDP81605 110 aaKnown RBP15.9■□□□□ 0.14
VIM-206ENST00000487938 SIGLEC14Q08ET2 396 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 SHBQ15464 509 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 OR8B12Q8NGG6 310 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 MICU1Q9BPX6 476 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 MYOTQ9UBF9 498 aa15.9■□□□□ 0.14
VIM-206ENST00000487938 A0A1W2PP11 408 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 TMEM14DPA8MWL7 114 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 NUPL2O15504 423 aaKnown RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 SOCS1O15524 211 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 MPIG6BO95866 241 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 IGHG1P01857 330 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 OR3A4PP47883 348 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 P2RY4P51582 365 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 SRSF4Q08170 494 aaKnown RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 CPEB2Q7Z5Q1 589 aaKnown RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 NOXO1Q8NFA2 376 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 OR5L2Q8NGL0 311 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 OR10K1Q8NGX5 313 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 MARCH1Q8TCQ1 289 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 PHB2Q99623 299 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 ZNF471Q9BX82 626 aaPredicted RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 AKIRIN1Q9H9L7 192 aaPredicted RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 FANCFQ9NPI8 374 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 GPR84Q9NQS5 396 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 WIF1Q9Y5W5 379 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 RNF222A6NCQ9 220 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 ZNF878C9JN71 531 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 EFSO43281 561 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 DLSTP36957 453 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 STARP49675 285 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 LPCAT3Q6P1A2 487 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 ZNF529Q6P280 563 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 GUSBP11Q6P575 273 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 HSD17B13Q7Z5P4 300 aaPredicted RBP15.89■□□□□ 0.13
VIM-206ENST00000487938 ZDHHC22Q8N966 263 aa15.89■□□□□ 0.13
VIM-206ENST00000487938 OR4K15Q8NH41 348 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms