RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 UXTQ9UBK9 157 aaPredicted RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 FHOD3Q2V2M9 1422 aa0.9□□□□□ -2.26
SMC4-219ENST00000487747 ICE1Q9Y2F5 2266 aa0.9□□□□□ -2.26
SMC4-219ENST00000487747 TRBV9A0A0B4J1U6 114 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 IGHV3OR16-9A0A0B4J2B5 98 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 IGHV1-69DA0A0B4J2H0 117 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 SIRPB1O00241 398 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 TNFRSF11BO00300 401 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 PLPP1O14494 284 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 NDUFAB1O14561 156 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 TAAR5O14804 337 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 CPLX1O14810 134 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 PLIN3O60664 434 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 EIF1BO60739 113 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 RDH16O75452 317 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 ANXA5P08758 320 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 PABPC4LP0CB38 370 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 TNNI1P19237 187 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 EIF1P41567 113 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 SLC1A1P43005 524 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 STXBP1P61764 594 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 RPS23P62266 143 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 SEMG2Q02383 582 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 PNOCQ13519 176 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 DDX39BQ13838 428 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 SSX2Q16385 188 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 YIF1BQ5BJH7 314 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 MBOAT1Q6ZNC8 495 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 MBOAT2Q6ZWT7 520 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 STK40Q8N2I9 435 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 NUBPLQ8TB37 319 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 SLC2A14Q8TDB8 520 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 ELMO1Q92556 727 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 RNF145Q96MT1 663 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 ZNF442Q9H7R0 627 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 TMEM27Q9HBJ8 222 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 TMEM165Q9HC07 324 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 MED4Q9NPJ6 270 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 NLE1Q9NVX2 485 aaPredicted RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 RHBDL2Q9NX52 303 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 MTCH1Q9NZJ7 389 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 CCDC59Q9P031 241 aaKnown RBP0.9□□□□□ -2.27
SMC4-219ENST00000487747 SLC17A7Q9P2U7 560 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 ATAD2BQ9ULI0 1458 aa0.9□□□□□ -2.27
SMC4-219ENST00000487747 IGLV10-54A0A075B6I4 117 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 IGKV1-27A0A075B6S5 117 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 NDUFC2-KCTD14E9PQ53 114 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 CLOCKO15516 846 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 FLOT1O75955 427 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 CD37P11049 281 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 POLR2IP36954 125 aaKnown RBP0.89□□□□□ -2.27
SMC4-219ENST00000487747 MPV17P39210 176 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 GALR1P47211 349 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 RAB10P61026 200 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 ACTR3P61158 418 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 ELF3P78545 371 aaPredicted RBP0.89□□□□□ -2.27
SMC4-219ENST00000487747 DEFB103AP81534 67 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 TGM3Q08188 693 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 PPM1LQ5SGD2 360 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 TMEM69Q5SWH9 247 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 C9orf135Q5VTT2 229 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 SLC8B1Q6J4K2 584 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 PRSS54Q6PEW0 395 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 ARL6IP6Q8N6S5 226 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 LY6G5BQ8NDX9 201 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 OR56B2PQ8NGI1 322 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 FBXO32Q969P5 355 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 CPNE4Q96A23 557 aaPredicted RBP0.89□□□□□ -2.27
SMC4-219ENST00000487747 EEF1AKMT3Q96AZ1 226 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 COX16Q9P0S2 106 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 CHTOPQ9Y3Y2 248 aaKnown RBP0.89□□□□□ -2.27
SMC4-219ENST00000487747 VWA8A3KMH1 1905 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 PCDH11XQ9BZA7 1347 aa0.89□□□□□ -2.27
SMC4-219ENST00000487747 DOCK6Q96HP0 2047 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 SMIM26A0A096LP01 95 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 TRBV11-1A0A0K0K1C0 115 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 H7C1H1 209 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 AIM2O14862 343 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR7C2O60412 319 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR2J3O76001 311 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 FSTL3O95633 263 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 BMI1P35226 326 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 UBE2E1P51965 193 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 SELENBP1Q13228 472 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 DMC1Q14565 340 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 PPP1R7Q15435 360 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 CEP55Q53EZ4 464 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 KLHL12Q53G59 568 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 XKR7Q5GH72 579 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 C22orf42Q6IC83 251 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 REEP3Q6NUK4 255 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 DEGS2Q6QHC5 323 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 SLC16A14Q7RTX9 510 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 CMC1Q7Z7K0 106 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 FAM228AQ86W67 206 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 FAM71AQ8IYT1 594 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 CMTM1Q8IZ96 169 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 GTPBP8Q8N3Z3 284 aaPredicted RBP0.88□□□□□ -2.27
SMC4-219ENST00000487747 CSGALNACT2Q8N6G5 542 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms