RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 RAB11AP62491 216 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 MYL5Q02045 173 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 IRF8Q02556 426 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SCRN3Q0VDG4 424 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 ILKQ13418 452 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 AQP6Q13520 282 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 STK38Q15208 465 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 RAB11BQ15907 218 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 MRPL23Q16540 153 aaKnown RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 DGUOKQ16854 277 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 LIN9Q5TKA1 542 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 RESP18Q5W5W9 173 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 Q6ZSR3 168 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 LRRC8AQ8IWT6 810 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 PGAM4Q8N0Y7 254 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 RNF182Q8N6D2 247 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 CSGALNACT2Q8N6G5 542 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 MITD1Q8WV92 249 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 TMIGD2Q96BF3 282 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 C8orf44Q96CB5 159 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SMIM10Q96HG1 83 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 ZBED3Q96IU2 234 aaPredicted RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 C8orf76Q96K31 380 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 FAM210AQ96ND0 272 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SPIN2AQ99865 258 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SPIN2BQ9BPZ2 258 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SIKE1Q9BRV8 207 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 GABARAPL3Q9BY60 117 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 NEUROG2Q9H2A3 272 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 ZNF430Q9H8G1 570 aaPredicted RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 ZDHHC4Q9NPG8 344 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 CD84Q9UIB8 345 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 PITPNC1Q9UKF7 332 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 RHBDD3Q9Y3P4 386 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 SLIT2O94813 1529 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 FOCADQ5VW36 1801 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 QSER1Q2KHR3 1735 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 UNC79Q9P2D8 2635 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 THSD7AQ9UPZ6 1657 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MYH1P12882 1939 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 UBN2Q6ZU65 1347 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MYO3BQ8WXR4 1341 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 NAV1Q8NEY1 1877 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 KCNE1BA0A087WTH5 132 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 A0A1W2PP18 115 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 ERICH2A1L162 156 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 ZNF879B4DU55 563 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 BET1O15155 118 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 POLR3GO15318 223 aaPredicted RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 CLOCKO15516 846 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MGRN1O60291 552 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 SMC2O95347 1197 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 SERPIND1P05546 499 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 TLX1NBP0CAT3 122 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 STOMP27105 288 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 NPBWR2P48146 333 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 NCBP2P52298 156 aaKnown RBP eCLIP2.25□□□□□ -2.05
TTC3-220ENST00000487711 YWHAGP61981 247 aaKnown RBP eCLIP2.25□□□□□ -2.05
TTC3-220ENST00000487711 KCNJ2P63252 427 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 HSDL1Q3SXM5 330 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 VPS26BQ4G0F5 336 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 TRIM40Q6P9F5 258 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 Q6ZR03 302 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 LINC00173Q6ZV60 143 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 LINC00523Q86TU6 105 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MREGQ8N565 214 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 ZNF615Q8N8J6 731 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 LILRB4Q8NHJ6 448 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 SYNPRQ8TBG9 265 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 GPR151Q8TDV0 419 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 DEDD2Q8WXF8 326 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 ESR2Q92731 530 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 LRRC58Q96CX6 371 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 PLEKHA8Q96JA3 519 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MS4A4EQ96PG1 132 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 TSSK3Q96PN8 268 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 PANX2Q96RD6 677 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 PAIP2Q9BPZ3 127 aaKnown RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 IL22Q9GZX6 179 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 PPA2Q9H2U2 334 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 FBXO44Q9H4M3 255 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 C8orf33Q9H7E9 229 aaPredicted RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 ZNHIT6Q9NWK9 470 aaKnown RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 MRPL22Q9NWU5 206 aaKnown RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 LYARQ9NX58 379 aaKnown RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 AHSPQ9NZD4 102 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 OPN4Q9UHM6 478 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 ZNF222Q9UK12 451 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 STK38LQ9Y2H1 464 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 V9GYY5 206 aaPredicted RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 RGPD3A6NKT7 1758 aaPredicted RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 RGPD4Q7Z3J3 1758 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 COL1A1P02452 1464 aaPredicted RBP2.25□□□□□ -2.05
TTC3-220ENST00000487711 LOXHD1Q8IVV2 1947 aa2.25□□□□□ -2.05
TTC3-220ENST00000487711 PLIN4Q96Q06 1357 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 TAF1LQ8IZX4 1826 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 ATAD5Q96QE3 1844 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms