RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 LUZP4Q9P127 313 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OR5V1Q9UGF6 321 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 STEAP1Q9UHE8 339 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 RAXQ9Y2V3 346 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 RHBDD3Q9Y3P4 386 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ETV7Q9Y603 341 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 A0A096LPE4 126 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 A0A1W2PPZ6 126 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 SLC34A2O95436 690 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 ADRB1P08588 477 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CSF3P09919 207 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 IL7P13232 177 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 OR2A2Q6IF42 318 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 SERPINA12Q8IW75 414 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CENPSQ8N2Z9 138 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 NKAIN3Q8N8D7 197 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 Q8NA96 180 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CPEB3Q8NE35 698 aaKnown RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 OR14K1Q8NGZ2 314 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 NOX3Q9HBY0 568 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 V9GYS6 101 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CHD8Q9HCK8 2581 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 A0A0G2JMP0 313 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 A0A0X1KG70 313 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MBD3L4A6NDZ8 208 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MBD3L3A6NE82 208 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MBD3L5A6NJ08 208 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 HLA-HP01893 362 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 HLA-DQB1P01920 261 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 TALDO1P37837 337 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 KIR2DL2P43627 348 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MADCAM1Q13477 382 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 IL18Q14116 193 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 KRTCAP3Q53RY4 240 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 PYDC2Q56P42 97 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 ANKRD16Q6P6B7 361 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 FAM180AQ6UWF9 173 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 COMMD2Q86X83 199 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 CCDC54Q8NEL0 328 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 OR1M1Q8NGA1 313 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 OR4M2Q8NGB6 313 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 MBD3L2Q8NHZ7 208 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 BCL2L2Q92843 193 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 SLC25A28Q96A46 364 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 FAM71F1Q96KD3 344 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-211ENST00000487698 OR10A2Q9H208 303 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 ABCG5Q9H222 651 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 B3GNT2Q9NY97 397 aa8.23□□□□□ -1.09
SF3B1-211ENST00000487698 A0A1W2PQ09 198 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 DHRS3O75911 302 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 COX5BP10606 129 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 ABOP16442 354 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF20P17024 532 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 NR4A2P43354 598 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 PITPNBP48739 271 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 SPOCK1Q08629 439 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 GFOD2Q3B7J2 385 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 C1orf100Q5SVJ3 147 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 GLT8D1Q68CQ7 371 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 RTL6Q6ICC9 239 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF585AQ6P3V2 769 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 COLCA1Q6ZS62 124 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 DPPA2Q7Z7J5 298 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 CMTM4Q8IZR5 234 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 OR5AS1Q8N127 324 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 OR8H2Q8N162 312 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 MINDY2Q8NBR6 621 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 OR5D14Q8NGL3 314 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 OR6K3Q8NGY3 331 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 TMEM138Q9NPI0 162 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 TBC1D24Q9ULP9 559 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 FAM215AQ9Y5M1 114 aa8.22□□□□□ -1.09
SF3B1-211ENST00000487698 LOC100509620A0A075B734 347 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 A6NIN4 97 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 DHRS7CA6NNS2 312 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SULT1B1O43704 296 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 WDR1O75083 606 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 BDKRB2P30411 391 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 ARR3P36575 388 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 GNALP38405 381 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 TDGF1P3P51864 188 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SF3B4Q15427 424 aaKnown RBP eCLIP8.21□□□□□ -1.092e-10■■■□□ 19.2
SF3B1-211ENST00000487698 RAB11BQ15907 218 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 HIKESHIQ53FT3 197 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 VWA1Q6PCB0 445 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 BAIAP2L2Q6UXY1 529 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 Q6ZT83 130 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 PGAP1Q75T13 922 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 Q8N402 240 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 OR6M1Q8NGM8 313 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 OR13C9Q8NGT0 318 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SETD6Q8TBK2 473 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SSC4DQ8WTU2 575 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 SGK3Q96BR1 496 aa8.21□□□□□ -1.09
SF3B1-211ENST00000487698 BOD1Q96IK1 185 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms