RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 C11orf71Q6IPW1 123 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 PAMR1Q6UXH9 720 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 TMPRSS11AQ6ZMR5 421 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 AHSA2Q719I0 299 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 PIGTQ969N2 578 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SPSB4Q96A44 273 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 PGAM5Q96HS1 289 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 RHNO1Q9BSD3 238 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 TRAF4Q9BUZ4 470 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-207ENST00000487645 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
COL4A6-207ENST00000487645 LIME1Q9H400 295 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 RGCCQ9H4X1 137 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 OPA3Q9H6K4 179 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 BRD7Q9NPI1 651 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 UBAP1Q9NZ09 502 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 DUSP13Q9UII6 198 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 ST6GALNAC2Q9UJ37 374 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 LAMP3Q9UQV4 416 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 PCDHGB5Q9Y5G0 923 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SNX5Q9Y5X3 404 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 A0A0U1RQV5 110 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 LOC110117498-PIK3R3F6TDL0 507 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 J3QLW9 94 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 OVOL3O00110 214 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 CLPTM1O96005 669 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 PNPP00491 289 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 CDK1P06493 297 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 SELEP16581 610 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF19P17023 458 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 CD53P19397 219 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 KITLGP21583 273 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 MPV17P39210 176 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 MVKQ03426 396 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 PSG7Q13046 419 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 GK2Q14410 553 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-207ENST00000487645 TP53I3Q53FA7 332 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF786Q8N393 782 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 RORBQ92753 470 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 NINJ1Q92982 152 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 SGK3Q96BR1 496 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 C4orf36Q96KX1 117 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 SIGLEC11Q96RL6 698 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 CDCA4Q9BXL8 241 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 PBOV1Q9GZY1 135 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 PTTG3PQ9NZH4 202 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF319Q9P2F9 582 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 NUFIP1Q9UHK0 495 aaKnown RBP11.41□□□□□ -0.58
COL4A6-207ENST00000487645 OR52A1Q9UKL2 312 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 BLOC1S6Q9UL45 172 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 FZR1Q9UM11 496 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 N6AMT1Q9Y5N5 214 aa11.41□□□□□ -0.58
COL4A6-207ENST00000487645 TBX1O43435 398 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 RPP14O95059 124 aaKnown RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 MT-ND5P03915 603 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 ADRA2AP08913 450 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 DNASE1P24855 282 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 C21orf33P30042 268 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 GBX2P52951 348 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 SNRPD2P62316 118 aaKnown RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF92Q03936 586 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 HLXQ14774 488 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 TIGD6Q17RP2 521 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 GLYATL3Q5SZD4 288 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 PGAP1Q75T13 922 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 CATSPERDQ86XM0 798 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 ELMOD2Q8IZ81 293 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 KLHL36Q8N4N3 616 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 OR8B12Q8NGG6 310 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 NRGNQ92686 78 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 PELI1Q96FA3 418 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 CCL19Q99731 98 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 SYT3Q9BQG1 590 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 MS4A5Q9H3V2 200 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 CXorf56Q9H5V9 222 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 ISG20L2Q9H9L3 353 aaKnown RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 G6PC2Q9NQR9 355 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 CYSLTR2Q9NS75 346 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 MYEF2Q9P2K5 600 aaKnown RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 CGGBP1Q9UFW8 167 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 PURGQ9UJV8 347 aaKnown RBP11.4□□□□□ -0.58
COL4A6-207ENST00000487645 ARID1AO14497 2285 aa11.4□□□□□ -0.58
COL4A6-207ENST00000487645 SETXQ7Z333 2677 aaKnown RBP11.4□□□□□ -0.59
COL4A6-207ENST00000487645 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 IQCF6A8MYZ5 107 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 MRPS14O60783 128 aaKnown RBP11.39□□□□□ -0.59
COL4A6-207ENST00000487645 RPSAP08865 295 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms