RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZNF133P52736 654 aaPredicted RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 RPS21P63220 83 aaKnown RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 ECH1Q13011 328 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 MPPED2Q15777 294 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 LY6G6FQ5SQ64 297 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 MKXQ8IYA7 352 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 FBXL13Q8NEE6 735 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 CXorf40AQ8TE69 158 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 GEMIN6Q8WXD5 167 aaKnown RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM158Q8WZ71 300 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 SLC38A4Q969I6 547 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 LRRC58Q96CX6 371 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 DNAJC19Q96DA6 116 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 AURKBQ96GD4 344 aaPredicted RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 ECSITQ9BQ95 431 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 HDHD3Q9BSH5 251 aaPredicted RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 OSBPL10Q9BXB5 764 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 GABARAPL3Q9BY60 117 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 DNTTIP1Q9H147 329 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 OR51M1Q9H341 326 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 PSTPIP2Q9H939 334 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM9BQ9NQ34 198 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 GNPTGQ9UJJ9 305 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 F11RQ9Y624 299 aaKnown RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 TCHHQ07283 1943 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 MYLKQ15746 1914 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 HECTD1Q9ULT8 2610 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM150BA6NC51 233 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ARL5CA6NH57 179 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 LRRIQ3A6PVS8 624 aaPredicted RBP3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 FAM166BA8MTA8 275 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 F6UB75 175 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 H0YC42 278 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 AIM2O14862 343 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 CDH16O75309 829 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 EEDO75530 441 aaKnown RBP3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PLEKHA8P1O95397 391 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PNMA6AP0CW24 399 aaPredicted RBP3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PSMC3P17980 439 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 HOXA6P31267 233 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 SERPINB5P36952 375 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 SYKP43405 635 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 RFX3P48380 749 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 C21orf59P57076 290 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ACTA2P62736 377 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 RPS15P62841 145 aaKnown RBP3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ACTG2P63267 376 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ACTC1P68032 377 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ACTA1P68133 377 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 SPAG1Q07617 926 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PON2Q15165 354 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PSMD5Q16401 504 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 FAM78AQ5JUQ0 283 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ANKRD26P1Q6NSI1 321 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ZNF429Q86V71 674 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PDIK1LQ8N165 341 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 FAM81AQ8TBF8 368 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 BLOC1S5Q8TDH9 187 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 TCEAL4Q96EI5 215 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 CHP1Q99653 195 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 SH3GL3Q99963 347 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 C20orf24Q9BUV8 137 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM185BQ9H7F4 350 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 ZNF160Q9HCG1 818 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 RPRD1BQ9NQG5 326 aaKnown RBP3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 CTPS2Q9NRF8 586 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PCYOX1Q9UHG3 505 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 VANGL2Q9ULK5 521 aa3.28□□□□□ -1.88
PRPF38A-203ENST00000487160 PIEZO2Q9H5I5 2752 aa3.28□□□□□ -1.89
PRPF38A-203ENST00000487160 COL12A1Q99715 3063 aa3.28□□□□□ -1.89
PRPF38A-203ENST00000487160 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF462Q96JM2 2506 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ANAPC1Q9H1A4 1944 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ERICH2A1L162 156 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 PRSS37A4D1T9 235 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 SPECC1L-ADORA2AF8WAN1 911 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 LAD1O00515 517 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 XKRYO14609 159 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 EIF3HO15372 352 aaKnown RBP eCLIP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 STAG3L3P0CL85 134 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 CCR2P41597 374 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 NMUP48645 174 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 SSR4P51571 173 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 CRISP3P54108 245 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 COA6Q5JTJ3 125 aaKnown RBP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 SPANXN2Q5MJ10 180 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 C6orf120Q7Z4R8 191 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC34A3Q8N130 599 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF433Q8N7K0 673 aaPredicted RBP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ARIH2OSQ8N7S6 290 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC7A13Q8TCU3 470 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 MSANTD3Q96H12 275 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 PKNOX2Q96KN3 472 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 BPIFA3Q9BQP9 254 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 C11orf70Q9BRQ4 267 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 CHMP4BQ9H444 224 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms