RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SPIN2AQ99865 258 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 SPIN2BQ9BPZ2 258 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 PDE7BQ9NP56 450 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 VSIG4Q9Y279 399 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 KLHDC2Q9Y2U9 406 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 LRP12Q9Y561 859 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 SCN2AQ99250 2005 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF587BE7ETH6 402 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 F5H5K5 113 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC33A1O00400 549 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 BPNT1O95861 308 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 GLI4P10075 376 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 ERGP11308 486 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 NTSR1P30989 418 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC26A5P58743 744 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 NAAAQ02083 359 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 TOMM34Q15785 309 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 CLEC9AQ6UXN8 241 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM182Q6ZP80 229 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 CDC20BQ86Y33 519 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 CERS4Q9HA82 394 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 THAP10Q9P2Z0 257 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC5A6Q9Y289 635 aa6.9□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF646O15015 1829 aaPredicted RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 C4orf51C9J302 202 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZIC2O95409 532 aaPredicted RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TXNDC12O95881 172 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 MT-ATP6P00846 226 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 RAB5AP20339 215 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 HNRNPA2B1P22626 353 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 DEFB115Q30KQ5 88 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF695Q8IW36 515 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 PLPP5Q8NEB5 264 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR51A2Q8NGJ7 313 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR13C8Q8NGS7 320 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 NUDT22Q9BRQ3 303 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 NMES1Q9C002 83 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR51M1Q9H341 326 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF442Q9H7R0 627 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 PLEKHA2Q9HB19 425 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 DNAJB11Q9UBS4 358 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 CCDC163A0A0D9SF12 145 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 A8MVM7 634 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 MFNGO00587 321 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 NDUFA2O43678 99 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 SFT2D2O95562 160 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 DIRAS3O95661 229 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 GJA4P35212 333 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 POLR2HP52434 150 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ISXQ2M1V0 245 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 C1orf140Q5VVS0 124 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 RTL6Q6ICC9 239 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 FAM57BQ71RH2 274 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 UEVLDQ8IX04 471 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TGM7Q96PF1 710 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR2A5Q96R48 311 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OPA3Q9H6K4 179 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 MRPS2Q9Y399 296 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 POMT1Q9Y6A1 747 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 SCN10AQ9Y5Y9 1956 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 PTPRDP23468 1912 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TRBV5-5A0A0J9YX44 114 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TCAPO15273 167 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 KLF8O95600 359 aaPredicted RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 LY86O95711 162 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 IFNA1P01562 189 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 CD8AP01732 235 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 GSTP1P09211 210 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ACAA2P42765 397 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 CASP6P55212 293 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 CARD18P57730 90 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 GPM6BQ13491 265 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF266Q14584 549 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF239Q16600 458 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 FAM78AQ5JUQ0 283 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OGFOD3Q6PK18 319 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 COMMD1Q8N668 190 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ADAD2Q8NCV1 583 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR2G3Q8NGZ4 309 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC25A28Q96A46 364 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 TSPAN32Q96QS1 320 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 PRRX2Q99811 253 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 S1PR5Q9H228 398 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF160Q9HCG1 818 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF107Q9UII5 783 aaPredicted RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 STRAPQ9Y3F4 350 aaKnown RBP6.89□□□□□ -1.31
COL6A4P1-202ENST00000487147 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
COL6A4P1-202ENST00000487147 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.88□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR2W5A6NFC9 320 aa6.88□□□□□ -1.31
COL6A4P1-202ENST00000487147 E5RGE8 158 aa6.88□□□□□ -1.31
COL6A4P1-202ENST00000487147 ST8SIA3O43173 380 aa6.88□□□□□ -1.31
COL6A4P1-202ENST00000487147 TNFSF12O43508 249 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms