RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PLPP3O14495 311 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 HDAC3O15379 428 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 PLPP2O43688 288 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MGRN1O60291 552 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ENTPD5O75356 428 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 SEC14L2O76054 403 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MPZL1O95297 269 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ANP32DO95626 131 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 RAB36O95755 333 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 HPRP00739 348 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 PTHP01270 115 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 BGLAPP02818 100 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 IDO1P14902 403 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 B4GALT1P15291 398 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 NQO1P15559 274 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF250P15622 560 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 BGNP21810 368 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 HTR2AP28223 471 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 AQP5P55064 265 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 HOXC5Q00444 222 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 PUDPQ08623 228 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 BST1Q10588 318 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 FADDQ13158 208 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 PMS2P3Q13401 168 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 CAMK2DQ13557 499 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MAD2L1BPQ15013 274 aaPredicted RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 RGNQ15493 299 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MOGQ16653 247 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 GLIPR1L2Q4G1C9 344 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 CARD17Q5XLA6 110 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM154Q6P9G4 183 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 DHRS4L2Q6PKH6 230 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 DPPA2Q7Z7J5 298 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 NOXA1Q86UR1 476 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 SKA3Q8IX90 412 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ZDHHC22Q8N966 263 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 OR4M2Q8NGB6 313 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 OR6N1Q8NGY5 312 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF519Q8TB69 540 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 SYNPRQ8TBG9 265 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 C11orf40Q8WZ69 217 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 RAB39BQ96DA2 213 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC47A1Q96FL8 570 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ITCHQ96J02 903 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MAELQ96JY0 434 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM43Q9BTV4 400 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 RSPO3Q9BXY4 272 aaPredicted RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ULBP2Q9BZM5 246 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 C1orf198Q9H425 327 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 RAD21L1Q9H4I0 556 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 NARFLQ9H6Q4 476 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 WDR55Q9H6Y2 383 aaPredicted RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF665Q9H7R5 613 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 NTN4Q9HB63 628 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM27Q9HBJ8 222 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A4GALTQ9NPC4 353 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MED29Q9NX70 200 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 SLCO1C1Q9NYB5 712 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MRPL39Q9NYK5 338 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 TAAR3PQ9P1P4 343 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 MYEF2Q9P2K5 600 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A3GALT2U3KPV4 340 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4EA0A075B759 164 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4CA0A0B4J2A2 164 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A0B4J2E0 115 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHV1-69-2A0A0G2JMI3 117 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1B0GX12 115 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PRORSD1PA6NEY8 169 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 C5orf58C9J3I9 102 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CLDN25C9JDP6 229 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4DF5H284 164 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 UBDO15205 165 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 RGS16O15492 202 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TPST1O60507 370 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TPST2O60704 377 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR6A2O95222 327 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 FARS2O95363 451 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SNAP29O95721 258 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CLPTM1O96005 669 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 MT-ATP6P00846 226 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHV3-13P01766 116 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHV2-5P01817 119 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PATE4P0C8F1 98 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ADORA3P0DMS8 318 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR8G3PP0DMU2 310 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4FP0DN26 164 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ADRA2CP18825 462 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CBLP22681 906 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 AHCYP23526 432 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 RAD52P43351 418 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 MAGEB1P43366 347 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CSNK1A1P48729 337 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 POLR2JP52435 117 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 UCP2P55851 309 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 BIDP55957 195 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 KLF3P57682 345 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 VSNL1P62760 191 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 UBA52P62987 128 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CCL8P80075 99 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms