RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PEAR1Q5VY43 1037 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 AWAT2Q6E213 333 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 ABHD12BQ7Z5M8 362 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 TRAPPC6BQ86SZ2 158 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 M1APQ8TC57 530 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 MARVELD3Q96A59 401 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 CMBLQ96DG6 245 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 SLC6A7Q99884 636 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 NUDT16L1Q9BRJ7 211 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 SLC2A8Q9NY64 477 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 TUBAL3A6NHL2 446 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 TMEM14DPA8MWL7 114 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 C9J4A7 227 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 NR2C1P13056 603 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 CCL1P22362 96 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 RAB14P61106 215 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 H3F3AP84243 136 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 C11orf88Q6PI97 169 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 C3P1Q6ZMU1 363 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 TMED4Q7Z7H5 227 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 COMMD2Q86X83 199 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 C12orf45Q8N5I9 185 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 CHST4Q8NCG5 386 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 ZBTB44Q8NCP5 570 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 OR4S1Q8NGB4 309 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 OR13C8Q8NGS7 320 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 GSX2Q9BZM3 304 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 FARSAQ9Y285 508 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 HS3ST3B1Q9Y662 390 aa15.9■□□□□ 0.14
PDLIM7-207ENST00000486828 CCL3P10147 92 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 SLC2A1P11166 492 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 CCL4P13236 92 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 ABOP16442 354 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 MPZP25189 248 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 CX3CR1P49238 355 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 DUSP3P51452 185 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 GRB2P62993 217 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 MC2RQ01718 297 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 RNASE10Q5GAN6 216 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 PGAP1Q75T13 922 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 ANGPTL5Q86XS5 388 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 OR5AS1Q8N127 324 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 NTNG2Q96CW9 530 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 GPR84Q9NQS5 396 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 GLTPQ9NZD2 209 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 ZNF319Q9P2F9 582 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 GPR179Q6PRD1 2367 aa15.89■□□□□ 0.13
PDLIM7-207ENST00000486828 OR14I1A6ND48 311 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 ARPC5O15511 151 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 LIFP15018 202 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 S100A11P31949 105 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 SSR4P51571 173 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 DSCR4P56555 118 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 SCGB2B2Q4G0G5 96 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 TOR2AQ5JU69 321 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 COMMD7Q86VX2 200 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 PAQR8Q8TEZ7 354 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 PRRT1Q99946 306 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 SOX7Q9BT81 388 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 PROK2Q9HC23 129 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 SH2D2AQ9NP31 389 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 PATE3B3GLJ2 98 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 GMFBP60983 142 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 LSM6P62312 80 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 ZMYND11Q15326 602 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 NHLRC3Q5JS37 347 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 B3GNTL1Q67FW5 361 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 TMUB2Q71RG4 321 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 DOK3Q7L591 496 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 OR2W3Q7Z3T1 314 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 ZNF283Q8N7M2 679 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 OR10R2Q8NGX6 335 aa15.88■□□□□ 0.13
PDLIM7-207ENST00000486828 FXYD6-FXYD2A0A087WZ82 144 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 EIF1BO60739 113 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 ZNF17P17021 662 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 ANOS1P23352 680 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 CTSSP25774 331 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 CSNK1A1P48729 337 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 HLXQ14774 488 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 NKPD1Q17RQ9 610 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 CLVS2Q5SYC1 327 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 C10orf128Q5T292 105 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 RAET1LQ5VY80 246 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 FAM57BQ71RH2 274 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 CCDC28AQ8IWP9 274 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 ZNF101Q8IZC7 436 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 GVQW1Q8N7I0 195 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 OR2Y1Q8NGV0 311 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 NUDCD2Q8WVJ2 157 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 PCNPQ8WW12 178 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 TMEM54Q969K7 222 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 ZC3H10Q96K80 434 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 FAM71F1Q96KD3 344 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 GNRHR2Q96P88 292 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 ZNF416Q9BWM5 594 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 FXYD6Q9H0Q3 95 aa15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 MRPS28Q9Y2Q9 187 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-207ENST00000486828 EML6Q6ZMW3 1958 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms