RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
MCF2L-227ENST00000486806 KCNN3Q9UGI6 736 aa8.25□□□□□ -1.09
MCF2L-227ENST00000486806 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
MCF2L-227ENST00000486806 TRBV2A0A0J9YWF9 115 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 A0A1B0GTI1 187 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 hCG_38984A0A1B0GV85 526 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 LOC107986453A0A1B0GWG9 222 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 A1L4Q6 167 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 FAM221AA4D161 298 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 H3BSA7 217 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 CASKO14936 926 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 XRCC2O43543 280 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 CD3EP07766 207 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 HSMCR30P0CW71 290 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 CD53P19397 219 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 CELP19835 753 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 TUBG1P23258 451 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 TGFBR2P37173 567 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 LIPAP38571 399 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 RAD52P43351 418 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 ERVS71-1P61550 626 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PPP1CBP62140 327 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 RPS11P62280 158 aaKnown RBP eCLIP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF92Q03936 586 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 SNTB2Q13425 540 aaKnown RBP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 TSTQ16762 297 aaKnown RBP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF544Q6NX49 715 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 UNQ6126/PRO20091Q6UXV3 157 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 FBXW12Q6X9E4 464 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PHC2Q8IXK0 858 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 C1orf174Q8IYL3 243 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PIAS4Q8N2W9 510 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 KBTBD8Q8NFY9 601 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 OR2AE1Q8NHA4 323 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 MARS2Q96GW9 593 aaKnown RBP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PSMG3-AS1Q96PY0 264 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 KCNS3Q9BQ31 491 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PDCD1LG2Q9BQ51 273 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 SOX7Q9BT81 388 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 RGCCQ9H4X1 137 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 OPA3Q9H6K4 179 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF442Q9H7R0 627 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 NDUFB11Q9NX14 153 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 EIF3KQ9UBQ5 218 aaKnown RBP8.24□□□□□ -1.09
MCF2L-227ENST00000486806 SCOCQ9UIL1 159 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF391Q9UJN7 358 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 GTF2A1LQ9UNN4 478 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 STARD10Q9Y365 291 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 RNF115Q9Y4L5 304 aa8.24□□□□□ -1.09
MCF2L-227ENST00000486806 PNMA8CA0A1B0GUJ8 204 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 LOC390937A0A1W2PQ73 354 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 A6NNC1 897 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 P2RY10O00398 339 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 CCRL2O00421 344 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 TBX1O43435 398 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SC5DO75845 299 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 ACHEP22303 614 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 GABRA5P31644 462 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 GLRXP35754 106 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SLC3A1Q07837 685 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 MALLQ13021 153 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 TNK1Q13470 666 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 GK2Q14410 553 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR8B8Q15620 311 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 TMEM255AQ5JRV8 349 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SPATA46Q5T0L3 261 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 MBNL2Q5VZF2 373 aaKnown RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SLC22A25Q6T423 547 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF704Q6ZNC4 412 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 RDH10Q8IZV5 341 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF676Q8N7Q3 588 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR51A4Q8NGJ6 313 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR5L1Q8NGL2 311 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR1J1Q8NGS3 322 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR13F1Q8NGS4 319 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR10AC1Q8NH08 325 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR5AK2Q8NH90 309 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 LILRB1Q8NHL6 650 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SLC25A40Q8TBP6 338 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR51E1Q8TCB6 317 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 TMEM171Q8WVE6 324 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 GHSRQ92847 366 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SGK3Q96BR1 496 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 PIK3IP1Q96FE7 263 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 REEP6Q96HR9 211 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR2J1Q9GZK6 312 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 COMMD4Q9H0A8 199 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 OR51B6Q9H340 312 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 GPR84Q9NQS5 396 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 CA10Q9NS85 328 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 ZNF281Q9Y2X9 895 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 SF3B6Q9Y3B4 125 aaKnown RBP8.23□□□□□ -1.09
MCF2L-227ENST00000486806 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
MCF2L-227ENST00000486806 LRRK2Q5S007 2527 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms