RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 GAL3ST4Q96RP7 486 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF587Q96SQ5 575 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 FAM173AQ9BQD7 235 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 SLC25A21Q9BQT8 299 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 TTTY12Q9BZ98 90 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 COQ3Q9NZJ6 369 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 CYB5R1Q9UHQ9 305 aa8.01□□□□□ -1.13
COL12A1-208ENST00000486533 TMA7Q9Y2S6 64 aaKnown RBP8.01□□□□□ -1.13
COL12A1-208ENST00000486533 POLQO75417 2590 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 OTOGQ6ZRI0 2925 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 A0A0B4J203 849 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 LOC100289279A0A1B0GTE1 492 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 GGT3PA6NGU5 568 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 A6NIZ1 184 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ZSCAN5BA6NJL1 495 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 OR4C45A6NMZ5 311 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 KRBOX1C9JBD0 128 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 F5H5P2 479 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 SLC17A2O00624 439 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ADAM10O14672 748 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 PIN1P1O15428 100 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF354AO60765 605 aaPredicted RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 UPK3AO75631 287 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 B3GALNT1O75752 331 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 OR2A4O95047 310 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ABHD16AO95870 558 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 IGKV3-11P04433 115 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 MELTFP08582 738 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 FBXO45P0C2W1 286 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 CCL3P10147 92 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 FSTP19883 344 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 CNR1P21554 472 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 CRABP1P29762 137 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 CDKN2AP42771 156 aaKnown RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 DNASE1L1P49184 302 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 NR0B1P51843 470 aaKnown RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 RIDAP52758 137 aaKnown RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 HCCSP53701 268 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 TAS2R19P59542 299 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 RAP1BP61224 184 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 RAP1AP62834 184 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 CBFBQ13951 182 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 PCGF3Q3KNV8 242 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 FAM209AQ5JX71 171 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 FNDC7Q5VTL7 733 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 SLC29A4Q7RTT9 530 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 PRSS45Q7RTY3 260 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 LRRTM1Q86UE6 522 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 MISPQ8IVT2 679 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 IZUMO1Q8IYV9 350 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 NKAIN3Q8N8D7 197 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF615Q8N8J6 731 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 LRRC75AQ8NAA5 344 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 OR4N2Q8NGD1 307 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 NUBPLQ8TB37 319 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 SCARB1Q8WTV0 552 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 THEM6Q8WUY1 208 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 TNFAIP8L1Q8WVP5 186 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 FOXRED1Q96CU9 486 aaPredicted RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 ELMOD3Q96FG2 381 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 C4orf45Q96LM5 186 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 OR2A7Q96R45 310 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 DMRTA2Q96SC8 542 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 GINS4Q9BRT9 223 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 ALX4Q9H161 411 aaPredicted RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 PPA2Q9H2U2 334 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 HEXA-AS1Q9H8Q6 139 aa8□□□□□ -1.13
COL12A1-208ENST00000486533 MRM2Q9UI43 246 aaKnown RBP8□□□□□ -1.13
COL12A1-208ENST00000486533 IGKV1D-42A0A075B6H8 117 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 hCG_1807616A0A1W2PRN6 198 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 OR6C76A6NM76 312 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 NPIPA2E9PIF3 369 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 NPIPA3F8WFD2 350 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 C19orf84I3L1E1 186 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 BET1O15155 118 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 OR2T1O43869 369 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 AQP8O94778 261 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 PMS2P2O95744 297 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ALOX5APP20292 161 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZP3P21754 424 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 S100A11P31949 105 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 PTGER4P35408 488 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 MAGEA5P43359 124 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 GSK3AP49840 483 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 POLR2HP52434 150 aaKnown RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 NANOS3P60323 173 aaKnown RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZP1P60852 638 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 SEC61A1P61619 476 aaKnown RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 RPL18Q07020 188 aaKnown RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 MEF2DQ14814 521 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 FAM189A2Q15884 450 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 SGCBQ16585 318 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 AANATQ16613 207 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 RAB12Q6IQ22 244 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF704Q6ZNC4 412 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ESPNLQ6ZVH7 1005 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF679Q8IYX0 411 aa7.99□□□□□ -1.13
COL12A1-208ENST00000486533 OR11H4Q8NGC9 324 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms