RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 PARP8Q8N3A8 854 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 RNF133Q8WVZ7 376 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 LRTOMTQ8WZ04 291 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 TIMD4Q96H15 378 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 G6PC2Q9NQR9 355 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 HIF1ANQ9NWT6 349 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 ZNF319Q9P2F9 582 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 PPP1R3CQ9UQK1 317 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 AP4S1Q9Y587 144 aa14.01□□□□□ -0.17
CCHCR1-214ENST00000486060 CCDC182A6NF36 153 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 CD300LBA8K4G0 201 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 TMEM178BH3BS89 294 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 PLPP2O43688 288 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 AVPP01185 164 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 SBK2P0C263 348 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 SRD5A1P18405 259 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 TNFRSF1AP19438 455 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 PAICSP22234 425 aaKnown RBP14□□□□□ -0.17
CCHCR1-214ENST00000486060 OPRL1P41146 370 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
CCHCR1-214ENST00000486060 PTGES3Q15185 160 aaKnown RBP14□□□□□ -0.17
CCHCR1-214ENST00000486060 KLHL12Q53G59 568 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 KDM4DQ6B0I6 523 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 PGAP1Q75T13 922 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 MRPL21Q7Z2W9 205 aaKnown RBP14□□□□□ -0.17
CCHCR1-214ENST00000486060 GLCCI1Q86VQ1 547 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 DNAJC9Q8WXX5 260 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 GAL3ST1Q99999 423 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 TMEM100Q9NV29 134 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 TVP23BQ9NYZ1 205 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 N6AMT1Q9Y5N5 214 aa14□□□□□ -0.17
CCHCR1-214ENST00000486060 ISPDA4D126 451 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 PRODHO43272 600 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 PRKYO43930 277 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 CYB5R3P00387 301 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 NAA10P41227 235 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 CX3CR1P49238 355 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 HCCSP53701 268 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 RAD23AP54725 363 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 EFNB1P98172 346 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 SLC3A1Q07837 685 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 MALLQ13021 153 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 TAF13Q15543 124 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 FAM201AQ5SY85 155 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 CXXC5Q7LFL8 322 aaKnown RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 BCDIN3DQ7Z5W3 292 aaKnown RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 MOGAT3Q86VF5 341 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 LRRC28Q86X40 367 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 OR51F2Q8NH61 342 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 OTOSQ8NHW6 89 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 DVL3Q92997 716 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 SPSB4Q96A44 273 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 RAB39BQ96DA2 213 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 KIF17Q9P2E2 1029 aa13.99□□□□□ -0.17
CCHCR1-214ENST00000486060 ZAR1LA6NP61 321 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 PRR32B1ATL7 298 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 G3V2T6 193 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 ZNF205O95201 554 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 CA6P23280 308 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 FASP25445 335 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 ZFP36P26651 326 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 ZNF121P58317 390 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SEC61A1P61619 476 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 BTG1P62324 171 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 ESRRGP62508 458 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 GRB2P62993 217 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 APOFQ13790 326 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 MPPED2Q15777 294 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SNAPC1Q16533 368 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SLC35D3Q5M8T2 416 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 PRAMEF6Q5VXH4 476 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SHFQ7M4L6 423 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SGK3Q96BR1 496 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 SEMA6AQ9H2E6 1030 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 PPP1R3EQ9H7J1 279 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 UBAP1Q9NZ09 502 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 DNAJC27Q9NZQ0 273 aa13.98□□□□□ -0.17
CCHCR1-214ENST00000486060 TRAV20A0A0B4J274 112 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 F5H0A9 414 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 IFNA2P01563 188 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 POLR2IP36954 125 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 CD200P41217 278 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 SRP9P49458 86 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 FAM3AP98173 230 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 SLX4IPQ5VYV7 408 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 C12orf73Q69YU5 71 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 RHOUQ7L0Q8 258 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 SLC16A9Q7RTY1 509 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 OR56B2PQ8NGI1 322 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 SPRYD4Q8WW59 207 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 TEAD3Q99594 435 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 TMPRSS13Q9BYE2 586 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 TOR3AQ9H497 397 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 PATZ1Q9HBE1 687 aaKnown RBP13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
CCHCR1-214ENST00000486060 GGT3PA6NGU5 568 aa13.96□□□□□ -0.17
CCHCR1-214ENST00000486060 H3BNX3 289 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms