RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ERVK-8P63133 956 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 REEP5Q00765 189 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 UBXN1Q04323 297 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 ACVR1Q04771 509 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 KLHL30Q0D2K2 578 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 ARHGAP19Q14CB8 494 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 AFTPHQ6ULP2 937 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 CES3Q6UWW8 571 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 CYHR1Q6ZMK1 362 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 MOB1BQ7L9L4 216 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 IFNEQ86WN2 208 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 CDKL3Q8IVW4 592 aaPredicted RBP2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 PRELID2Q8N945 189 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 MLKLQ8NB16 471 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 MORN4Q8NDC4 146 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 OR8K3Q8NH51 312 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 HGDQ93099 445 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 NEIL2Q969S2 332 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 NAP1L5Q96NT1 182 aaPredicted RBP2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 KLHDC3Q9BQ90 382 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 DESI2Q9BSY9 194 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 ERVK-6Q9BXR3 956 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 OSBPL8Q9BZF1 889 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 NARFLQ9H6Q4 476 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 CBLN4Q9NTU7 201 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 FETUBQ9UGM5 382 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 HOOK1Q9UJC3 728 aaKnown RBP2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 IKBKGQ9Y6K9 419 aa2.95□□□□□ -1.94
SMARCC1-207ENST00000485833 NPIPA7E9PJI5 369 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 H7C0C1 242 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ARPC1BO15143 372 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CFLARO15519 480 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ERI3O43414 337 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ICOSLGO75144 302 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ECDO95905 644 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CATP04040 527 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CRHP06850 196 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 IGFBP1P08833 259 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CT62P0C5K7 136 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 NPIPA8P0DM63 369 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 TNNI3P19429 210 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 RPS3P23396 243 aaKnown RBP eCLIP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 RPL22P35268 128 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ATP5OP48047 213 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 EFNA4P52798 201 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 PLA2G16P53816 162 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CDH17Q12864 832 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 RAB35Q15286 201 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 C18orf21Q32NC0 220 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 LGSNQ5TDP6 509 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 HIST2H2AA3Q6FI13 130 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ASPHD2Q6ICH7 369 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 LEG1Q6P5S2 330 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 AGTRAPQ6RW13 159 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 TSEN54Q7Z6J9 526 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CPNE9Q8IYJ1 553 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 GABRG1Q8N1C3 465 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ZCCHC24Q8N2G6 241 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 MUC15Q8N387 334 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 OR1J4Q8NGS1 313 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 OR52J3Q8NH60 311 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ACTL9Q8TC94 416 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ZNF418Q8TF45 676 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 KRT35Q92764 455 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 P3H4Q92791 437 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 MS4A6EQ96DS6 147 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 RBMXL1Q96E39 390 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 FOPNLQ96NB1 174 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 NAP1L3Q99457 506 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 VAT1Q99536 393 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ZNF184Q99676 751 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 EBNA1BP2Q99848 306 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 EBF4Q9BQW3 602 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 NXF5Q9H1B4 397 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 CDC42EP4Q9H3Q1 356 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 EHD1Q9H4M9 534 aa2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 ZCCHC3Q9NUD5 404 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 UTP6Q9NYH9 597 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-207ENST00000485833 MACROD2A1Z1Q3 448 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 LRIT2A6NDA9 550 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 PDLIM1O00151 329 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 CTNSO60931 367 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 SS18L1O75177 396 aaPredicted RBP2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 UGT2B11O75310 529 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 LYZL6O75951 148 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 SNX4O95219 450 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 TGDSO95455 350 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 AIFM1O95831 613 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 TACSTD2P09758 323 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 HIST1H2AGP0C0S8 130 aaPredicted RBP2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 CCDC172P0C7W6 258 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 TPSB2P20231 275 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 AGTR1P30556 359 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 POU3F4P49335 361 aa2.93□□□□□ -1.94
SMARCC1-207ENST00000485833 FABP6P51161 128 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms