RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 M0R135 149 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-205ENST00000485397 GSSP48637 474 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF92Q03936 586 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL27A1-205ENST00000485397 SNAI3Q3KNW1 292 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 OR2AE1Q8NHA4 323 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 ZNRF4Q8WWF5 429 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF799Q96GE5 643 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 ELAC2Q9BQ52 826 aaKnown RBP15.99■□□□□ 0.15
COL27A1-205ENST00000485397 PCGF1Q9BSM1 259 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 NSRP1Q9H0G5 558 aaKnown RBP15.99■□□□□ 0.15
COL27A1-205ENST00000485397 SLITRK2Q9H156 845 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 MMADHCQ9H3L0 296 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-205ENST00000485397 RNF7Q9UBF6 113 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 MEGF8Q7Z7M0 2845 aa15.99■□□□□ 0.15
COL27A1-205ENST00000485397 FAM181BA6NEQ2 426 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 TVP23AA6NH52 213 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 LGALS8O00214 317 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 ENSAO43768 121 aaKnown RBP15.98■□□□□ 0.15
COL27A1-205ENST00000485397 IDH3BO43837 385 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 SFTPBP07988 381 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF823P16415 610 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 RRM2P31350 389 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 GPR157Q5UAW9 335 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 LYPD4Q6UWN0 246 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF620Q6ZNG0 422 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 GNPDA2Q8TDQ7 276 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 TECTBQ96PL2 329 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 DDOQ99489 341 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 MARCH7Q9H992 704 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 FN3KRPQ9HA64 309 aa15.98■□□□□ 0.15
COL27A1-205ENST00000485397 GGT3PA6NGU5 568 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 SRRM5B3KS81 715 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 C3orf80F5H4A9 247 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 PSKH1P11801 424 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 PRDX6P30041 224 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 CFHR2P36980 270 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 IFNGR2P38484 337 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 SRSF4Q08170 494 aaKnown RBP15.97■□□□□ 0.15
COL27A1-205ENST00000485397 TSPAN31Q12999 210 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 PGBD2Q6P3X8 592 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 CYB561A3Q8NBI2 242 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 SPTSSAQ969W0 71 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 MCUR1Q96AQ8 359 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 TBX15Q96SF7 602 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 ADAT1Q9BUB4 502 aaKnown RBP15.97■□□□□ 0.15
COL27A1-205ENST00000485397 SLC22A4Q9H015 551 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 RASSF4Q9H2L5 321 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 EGLN3Q9H6Z9 239 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 ERVK-18Q9QC07 812 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 KCNG2Q9UJ96 466 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 MMP24Q9Y5R2 645 aa15.97■□□□□ 0.15
COL27A1-205ENST00000485397 TNFRSF13BO14836 293 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-205ENST00000485397 ADAM20O43506 726 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 PTBP3O95758 552 aaKnown RBP15.96■□□□□ 0.15
COL27A1-205ENST00000485397 FABP3P05413 133 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 NPY4RP50391 375 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 OR8B8Q15620 311 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 HSP90B2PQ58FF3 399 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 GLYATL3Q5SZD4 288 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 FIP1L1Q6UN15 594 aaKnown RBP15.96■□□□□ 0.15
COL27A1-205ENST00000485397 Q6YL49 198 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF826PQ6ZT77 177 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 KIR3DL3Q8N743 410 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 PROKR2Q8NFJ6 384 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 OR51L1Q8NGJ5 315 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 NSMCE2Q96MF7 247 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 SMURF1Q9HCE7 757 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 C1orf123Q9NWV4 160 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 MAGEL2Q9UJ55 1249 aa15.96■□□□□ 0.15
COL27A1-205ENST00000485397 ZNF879B4DU55 563 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 P2RY10O00398 339 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 GMDSO60547 372 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 HSD17B1P14061 328 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 MMP9P14780 707 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 OTX1P32242 354 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-205ENST00000485397 PRKXP51817 358 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 BPIFB3P59826 476 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 DEFA6Q01524 100 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 CD276Q5ZPR3 534 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 CHIAQ9BZP6 476 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 NOX4Q9NPH5 578 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 CD300AQ9UGN4 299 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 NOP16Q9Y3C1 178 aaKnown RBP15.95■□□□□ 0.14
COL27A1-205ENST00000485397 N6AMT1Q9Y5N5 214 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 CDH10Q9Y6N8 788 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 PKD1L1Q8TDX9 2849 aa15.95■□□□□ 0.14
COL27A1-205ENST00000485397 CENPVL3A0A0U1RRI6 287 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 BHLHE40O14503 412 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 ARPC2O15144 300 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 FCN3O75636 299 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 TOX4O94842 621 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 GYPAP02724 150 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 GRPP07492 148 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 MELTFP08582 738 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 SLC2A1P11166 492 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 RELBQ01201 579 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 POU4F2Q12837 409 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 KCNJ8Q15842 424 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms