RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PIKFYVEQ9Y2I7 2098 aa2.4□□□□□ -2.02
SMC4-215ENST00000484799 IGLV4-69A0A075B6H9 119 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 IGLV1-50A0A075B6I6 118 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 IGKV1D-17A0A075B6S4 117 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 GOLGA8JA6NMD2 632 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 INS-IGF2F8WCM5 200 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 M0QX08 132 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 NVLO15381 856 aaKnown RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 YKT6O15498 198 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 RDH16O75452 317 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 SEMA3DO95025 777 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 GABARAPO95166 117 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 LCA5LO95447 670 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 CATP04040 527 aaKnown RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 CTSLP07711 333 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 CD3GP09693 182 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR8U9P0C7N5 309 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 GOLGA8HP0CJ92 632 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 CCNOP22674 350 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 SERPINB8P50452 374 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 ZNF136P52737 540 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 HADHBP55084 474 aaKnown RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 SYNJ2BPP57105 145 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 TAS2R60P59551 318 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR2B8PP59922 312 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 ATP6V0D1P61421 351 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 RCAN2Q14206 197 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 IRF4Q15306 451 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 TSC22D1Q15714 1073 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 UBE2SQ16763 222 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 ORMDL2Q53FV1 153 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 C16orf87Q6PH81 154 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 FBXW12Q6X9E4 464 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 TMPRSS11AQ6ZMR5 421 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 SNX20Q7Z614 316 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 LYPD1Q8N2G4 141 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 COX18Q8N8Q8 333 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR11H7Q8NGC8 314 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR10Z1Q8NGY1 313 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR8U1Q8NH10 309 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 OR10G6Q8NH81 332 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 LRRC20Q8TCA0 184 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 ASZ1Q8WWH4 475 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 RGP1Q92546 391 aaPredicted RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 RSPO3Q9BXY4 272 aaPredicted RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 RPP21Q9H633 154 aaKnown RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 MYOZ1Q9NP98 299 aaPredicted RBP2.4□□□□□ -2.03
SMC4-215ENST00000484799 CAMTA1Q9Y6Y1 1673 aa2.4□□□□□ -2.03
SMC4-215ENST00000484799 TET2Q6N021 2002 aaPredicted RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 H7C417 338 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 GABRPO00591 440 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 GATCO43716 136 aaKnown RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 PLEKHA8P1O95397 391 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 PTHP01270 115 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 PGA5P0DJD9 388 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 PRPS2P11908 318 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TCN2P20062 427 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 RBM34P42696 430 aaKnown RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 PPICP45877 212 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 RAB7AP51149 207 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 RPS23P62266 143 aaKnown RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 PON2Q15165 354 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 RGNQ15493 299 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 ATP6V1FQ16864 119 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TCEAL5Q5H9L2 206 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 AVPI1Q5T686 147 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TSPO2Q5TGU0 170 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 FAM92BQ6ZTR7 304 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 PID1Q7Z2X4 250 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 ZFP41Q8N8Y5 198 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 OR10AD1Q8NGE0 317 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 OR10W1Q8NGF6 305 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 OR4A15Q8NGL6 344 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 LRRC29Q8WV35 223 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TMEM158Q8WZ71 300 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TCEAL3Q969E4 200 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TM4SF18Q96CE8 201 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 HAUS1Q96CS2 278 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 SGTBQ96EQ0 304 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 GLT1D1Q96MS3 346 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 RNF145Q96MT1 663 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TEAD3Q99594 435 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 NAA50Q9GZZ1 169 aaKnown RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 TOLLIPQ9H0E2 274 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 SAV1Q9H4B6 383 aaPredicted RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 SYNDIG1Q9H7V2 258 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 REEP1Q9H902 201 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 NOX3Q9HBY0 568 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 VCX3AQ9NNX9 186 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 TREX1Q9NSU2 369 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 MTFP1Q9UDX5 166 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 HYOU1Q9Y4L1 999 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 MN1Q10571 1320 aaPredicted RBP2.39□□□□□ -2.03
SMC4-215ENST00000484799 MROH7Q68CQ1 1323 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 MAP3K15Q6ZN16 1313 aa2.39□□□□□ -2.03
SMC4-215ENST00000484799 PALLDQ8WX93 1383 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 IGHV5-51A0A0C4DH38 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms