RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 KRR1Q13601 381 aaKnown RBP10.56□□□□□ -0.72
UBR4-213ENST00000483922 CDONQ4KMG0 1287 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 LRRC23Q53EV4 343 aaPredicted RBP10.56□□□□□ -0.72
UBR4-213ENST00000483922 LINC00346Q8IVM7 164 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 RNF113BQ8IZP6 322 aaKnown RBP10.56□□□□□ -0.72
UBR4-213ENST00000483922 OFCC1Q8IZS5 231 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 GJC3Q8NFK1 279 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 ACOT11Q8WXI4 607 aaPredicted RBP10.56□□□□□ -0.72
UBR4-213ENST00000483922 SEH1LQ96EE3 360 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 AJUBAQ96IF1 538 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 DPAGT1Q9H3H5 408 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 TOR3AQ9H497 397 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 DNAJB11Q9UBS4 358 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
UBR4-213ENST00000483922 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
UBR4-213ENST00000483922 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 OOEPA6NGQ2 149 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 F5H5K5 113 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.55□□□□□ -0.72
UBR4-213ENST00000483922 XKRYO14609 159 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 SDHAP31040 664 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 EFNB2P52799 333 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 ZNF92Q03936 586 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 KLRD1Q13241 179 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 CYLC2Q14093 348 aaPredicted RBP10.55□□□□□ -0.72
UBR4-213ENST00000483922 HERPUD1Q15011 391 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 TRAM2Q15035 370 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 OR8B8Q15620 311 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 SNAI3Q3KNW1 292 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
UBR4-213ENST00000483922 SLC18B1Q6NT16 456 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 WDR86Q86TI4 376 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 LYG1Q8N1E2 194 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 OR8J3Q8NGG0 315 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 C17orf50Q8WW18 174 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 HCAR1Q9BXC0 346 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 PPA2Q9H2U2 334 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 PPP1R3EQ9H7J1 279 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 SRA1Q9HD15 236 aaKnown RBP10.55□□□□□ -0.72
UBR4-213ENST00000483922 SIRT7Q9NRC8 400 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 C1orf123Q9NWV4 160 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 KIF17Q9P2E2 1029 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 KAAG1Q9UBP8 84 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 B9D1Q9UPM9 204 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 IER3IP1Q9Y5U9 82 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 KPTNQ9Y664 436 aa10.55□□□□□ -0.72
UBR4-213ENST00000483922 CD300LBA8K4G0 201 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 TXNDC12O95881 172 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 VSIG8P0DPA2 414 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 PSKH1P11801 424 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 PAX6P26367 422 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 GGT2P36268 569 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 TGFBR2P37173 567 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 MDH1P40925 334 aaKnown RBP10.54□□□□□ -0.72
UBR4-213ENST00000483922 OR8G1Q15617 311 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 METAP1DQ6UB28 335 aaPredicted RBP10.54□□□□□ -0.72
UBR4-213ENST00000483922 SLC26A10Q8NG04 563 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 SLC7A13Q8TCU3 470 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 STON2Q8WXE9 905 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 FAM46AQ96IP4 442 aaKnown RBP10.54□□□□□ -0.72
UBR4-213ENST00000483922 MAP6Q96JE9 813 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 GPX7Q96SL4 187 aaPredicted RBP10.54□□□□□ -0.72
UBR4-213ENST00000483922 CCL13Q99616 98 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 FNDC11Q9BVV2 318 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 FN3KRPQ9HA64 309 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
UBR4-213ENST00000483922 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
UBR4-213ENST00000483922 TRAV38-1A0A0B4J264 116 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 NDUFA2O43678 99 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 NDUFB2O95178 105 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 ECDO95905 644 aaPredicted RBP10.53□□□□□ -0.72
UBR4-213ENST00000483922 TFF1P04155 84 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 LCATP04180 440 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 GRPP07492 148 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 VIMP08670 466 aaKnown RBP10.53□□□□□ -0.72
UBR4-213ENST00000483922 FBP1P09467 338 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 OMPP47874 163 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 LOXL3P58215 753 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 TRAP1Q12931 704 aaKnown RBP10.53□□□□□ -0.72
UBR4-213ENST00000483922 ZNF730Q6ZMV8 503 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 PGAP1Q75T13 922 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 OR2AE1Q8NHA4 323 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 SPRYD4Q8WW59 207 aaPredicted RBP10.53□□□□□ -0.72
UBR4-213ENST00000483922 LRTOMTQ8WZ04 291 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 ST8SIA4Q92187 359 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 ADAT1Q9BUB4 502 aaKnown RBP10.53□□□□□ -0.72
UBR4-213ENST00000483922 CYB5R1Q9UHQ9 305 aa10.53□□□□□ -0.72
UBR4-213ENST00000483922 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
UBR4-213ENST00000483922 FAM220BPB1ANY3 271 aa10.52□□□□□ -0.73
UBR4-213ENST00000483922 NPFFO15130 113 aa10.52□□□□□ -0.73
UBR4-213ENST00000483922 GMDSO60547 372 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms