RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 Q56UQ5 140 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 ACSM5Q6NUN0 579 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 OR5D13Q8NGL4 314 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 OR1L6Q8NGR2 347 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 GPX7Q96SL4 187 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-207ENST00000483888 FBXL12Q9NXK8 326 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 TGIF2-C20orf24A0A0A6YYL0 155 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 VWA2Q5GFL6 755 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 PELI2Q9HAT8 420 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 MDC1Q14676 2089 aaKnown RBP9.35□□□□□ -0.91
COL12A1-207ENST00000483888 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 C9J4A7 227 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 H3BQ15 152 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 HIST1H1CP16403 213 aaKnown RBP9.35□□□□□ -0.91
COL12A1-207ENST00000483888 IHHQ14623 411 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 CLEC4DQ8WXI8 215 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 TEX101Q9BY14 249 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 SLC5A10A0PJK1 596 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 GCH1P30793 250 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 CD96P40200 585 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 GNG4P50150 75 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 C6orf201Q7Z4U5 140 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 PRR22Q8IZ63 422 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 SLC46A1Q96NT5 459 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 RASL12Q9NYN1 266 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-207ENST00000483888 DHODHQ02127 395 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 IGSF8Q969P0 613 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 TEAD3Q99594 435 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 NOSIPQ9Y314 301 aaKnown RBP9.35□□□□□ -0.91
COL12A1-207ENST00000483888 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 CD79AP11912 226 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 DACT2Q5SW24 774 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
COL12A1-207ENST00000483888 OR2M5A3KFT3 312 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 GLSO94925 669 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SLC2A10O95528 541 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 GPR12P47775 334 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 HRASLS2Q9NWW9 162 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 DNPH1O43598 174 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 IGHG1P01857 330 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SOD3P08294 240 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 APLNRP35414 380 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 OR4C12Q96R67 309 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 PIM1P11309 404 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 STAC2Q6ZMT1 411 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SERINC5Q86VE9 423 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 NEURL3Q96EH8 262 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 CITED1Q99966 193 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ALX4Q9H161 411 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 TRGC2P03986 189 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 CTSCP53634 463 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 EMP1P54849 157 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SHHQ15465 462 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SLC17A9Q9BYT1 436 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 MYPOPQ86VE0 399 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 APCDD1Q8J025 514 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ZDHHC22Q8N966 263 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 HES4Q9HCC6 221 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 TREM2Q9NZC2 230 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 CNIH1O95406 144 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SPINT3P49223 89 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ZNF805Q5CZA5 627 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ZNF511Q8NB15 262 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ZC3HAV1LQ96H79 300 aaKnown RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SERTAD3Q9UJW9 196 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 FOXJ3Q9UPW0 622 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 V9GYH0 126 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 A0A0B4J293 547 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 CDS2O95674 445 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 NDUFB7P17568 137 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 F2RP25116 425 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 BMI1P35226 326 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-207ENST00000483888 MDGA1Q8NFP4 955 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 ASB11Q8WXH4 323 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
COL12A1-207ENST00000483888 DSCR3O14972 297 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 VEGFDO43915 354 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ZNF253O75346 499 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PIAS2O75928 621 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ACER2Q5QJU3 275 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ACOT4Q8N9L9 421 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 OR4S1Q8NGB4 309 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 DNAJB11Q9UBS4 358 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PRSS50Q9UI38 385 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 BCL9O00512 1426 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 LDB3O75112 727 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 ZNF628Q5EBL2 1059 aa9.33□□□□□ -0.92
COL12A1-207ENST00000483888 PTOV1Q86YD1 416 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms