RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZNF826PQ6ZT77 177 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 OR11L1Q8NGX0 322 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 OR4K13Q8NH42 304 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 SPRYD4Q8WW59 207 aaPredicted RBP11.53□□□□□ -0.56
VARS-226ENST00000483275 ATF6BQ99941 703 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 CITED1Q99966 193 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 ADAT1Q9BUB4 502 aaKnown RBP11.53□□□□□ -0.56
VARS-226ENST00000483275 SEMA6AQ9H2E6 1030 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 PNRC2Q9NPJ4 139 aaKnown RBP11.53□□□□□ -0.56
VARS-226ENST00000483275 NDUFAF4Q9P032 175 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 AURKCQ9UQB9 309 aa11.53□□□□□ -0.56
VARS-226ENST00000483275 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 A0A1B0GW55 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 A0A1W2PRQ8 180 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 TSPAN15O95858 294 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 TXNDC12O95881 172 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 HLA-DQA2P01906 255 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 GYPAP02724 150 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 MMP9P14780 707 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 HIST1H1CP16403 213 aaKnown RBP11.52□□□□□ -0.57
VARS-226ENST00000483275 CD200P41217 278 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 RPS6KA3P51812 740 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DGCR6Q14129 220 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 OR8B8Q15620 311 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DNM1P34Q6PK57 102 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4L9Q6RFH8 374 aaPredicted RBP11.52□□□□□ -0.57
VARS-226ENST00000483275 SMARCD3Q6STE5 483 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 MRPL21Q7Z2W9 205 aaKnown RBP11.52□□□□□ -0.57
VARS-226ENST00000483275 SDR9C7Q8NEX9 313 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 Q8TCH9 128 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 LHX4Q969G2 390 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 PKP2Q99959 881 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 MYLK2Q9H1R3 596 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 ANKRD19PQ9H560 264 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 ADA2Q9NZK5 511 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 DUX4Q9UBX2 424 aa11.52□□□□□ -0.57
VARS-226ENST00000483275 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 GPR137BO60478 399 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 NDUFA7O95182 113 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 CRABP1P29762 137 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 PYCR1P32322 319 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 GGT2P36268 569 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 DLX1P56177 255 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 ZNF92Q03936 586 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 MALLQ13021 153 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 SLC35F1Q5T1Q4 408 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 HIST2H2BDQ6DRA6 164 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 HACD2Q6Y1H2 254 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 PGAP1Q75T13 922 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 PIGWQ7Z7B1 504 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 MAP6Q96JE9 813 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 WDFY2Q96P53 400 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 KCTD14Q9BQ13 255 aaPredicted RBP11.51□□□□□ -0.57
VARS-226ENST00000483275 IFT27Q9BW83 186 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 MRPL22Q9NWU5 206 aaKnown RBP11.51□□□□□ -0.57
VARS-226ENST00000483275 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 RNF7Q9UBF6 113 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 DNAJB11Q9UBS4 358 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 N6AMT1Q9Y5N5 214 aa11.51□□□□□ -0.57
VARS-226ENST00000483275 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 hCG_1807616A0A1W2PRN6 198 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 OR6C68A6NDL8 312 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 TVP23AA6NH52 213 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 A6NLC8 198 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 CD300LBA8K4G0 201 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 M0QZ24 198 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 LGALS8O00214 317 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 P2RY10O00398 339 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
VARS-226ENST00000483275 OR10H3O60404 316 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 RENP00797 406 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 GRPP07492 148 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 SLC2A1P11166 492 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 CPT2P23786 658 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 ARF6P62330 175 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 MXRA7P84157 204 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 GLYATL3Q5SZD4 288 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 C8orf82Q6P1X6 216 aaPredicted RBP11.5□□□□□ -0.57
VARS-226ENST00000483275 ZNF620Q6ZNG0 422 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 RNF148Q8N7C7 305 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 OR2AJ1Q8NGZ0 328 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 SSMEM1Q8WWF3 244 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 ZNRF4Q8WWF5 429 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 GATAD2BQ8WXI9 593 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 C7orf34Q96L11 122 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 RBM4BQ9BQ04 359 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms