RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MLLT11Q13015 90 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 KRTAP27-1Q3LI81 207 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 UNQ6126/PRO20091Q6UXV3 157 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 NRGNQ92686 78 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 UFD1Q92890 307 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 DOK1Q99704 481 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 BCL2L14Q9BZR8 327 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 PLEKHF2Q9H8W4 249 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 R4GMQ9 66 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 ABCA12Q86UK0 2595 aa17.16■□□□□ 0.34
TRAPPC12-220ENST00000482645 UNC79Q9P2D8 2635 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 FLNBO75369 2602 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 OTX1P32242 354 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 ALDH3B2P48448 385 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 PPP1CBP62140 327 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 RPS23P62266 143 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 MRPL28Q13084 256 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 BLMHQ13867 455 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 SYT6Q5T7P8 510 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 LIPKQ5VXJ0 399 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 RGS7BPQ6MZT1 257 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 DRAM2Q6UX65 266 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 TMIGD2Q96BF3 282 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 NIPAL2Q9H841 368 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 ST6GALNAC2Q9UJ37 374 aa17.15■□□□□ 0.34
TRAPPC12-220ENST00000482645 TMEM269A0A1B0GVZ9 245 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 LOC110117498-PIK3R3F6TDL0 507 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 GLRXP35754 106 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 RGS6P49758 472 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 ZNF121P58317 390 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 NANOS3P60323 173 aaKnown RBP17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 BDH1Q02338 343 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 ACSM1Q08AH1 577 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 CDK5R1Q15078 307 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 FAM57BQ71RH2 274 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 HAVCR2Q8TDQ0 301 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 RNF166Q96A37 237 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 APOBEC3DQ96AK3 386 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 DHRS9Q9BPW9 319 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 OR2J1Q9GZK6 312 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 POFUT1Q9H488 388 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 TBCCD1Q9NVR7 557 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 FAM206AQ9NX38 181 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 PTTG3PQ9NZH4 202 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 STARD10Q9Y365 291 aa17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 SIRT4Q9Y6E7 314 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-220ENST00000482645 TBX1O43435 398 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 SRSF10O75494 262 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 PNPP00491 289 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 OR4A8P0C604 315 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 CELP19835 753 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 ANOS1P23352 680 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 LIPAP38571 399 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 TGM4P49221 684 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 ADIPOQQ15848 244 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 SNAI3Q3KNW1 292 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 WDR38Q5JTN6 314 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 BCL2L15Q5TBC7 163 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 RPL22L1Q6P5R6 122 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 GPR141Q7Z602 305 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 SATL1Q86VE3 508 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 SLC25A40Q8TBP6 338 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 TMEM171Q8WVE6 324 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 SYT3Q9BQG1 590 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 C1QTNF5Q9BXJ0 243 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 LIME1Q9H400 295 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 ISYNA1Q9NPH2 558 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 DUSP13Q9UII6 198 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 CMAHPQ9Y471 501 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 CACNA1DQ01668 2161 aa17.13■□□□□ 0.33
TRAPPC12-220ENST00000482645 TRBV2A0A0J9YWF9 115 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 ICMTO60725 284 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 APOC1P02654 83 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 APOBEC3AP31941 199 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 DCTDP32321 178 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 SLC3A1Q07837 685 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 MSMPQ1L6U9 139 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 GFOD2Q3B7J2 385 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 EGFL6Q8IUX8 553 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 FBXL14Q8N1E6 418 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 MUC15Q8N387 334 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 PRSS35Q8N3Z0 413 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 OR13F1Q8NGS4 319 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 OR2G2Q8NGZ5 317 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 SMIM19Q96E16 107 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 ZNF442Q9H7R0 627 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 MOB1AQ9H8S9 216 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 FAIMQ9NVQ4 179 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 LAMP3Q9UQV4 416 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 CSMD2Q7Z408 3487 aa17.12■□□□□ 0.33
TRAPPC12-220ENST00000482645 C5orf63A6NC05 138 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 VSTM5A8MXK1 200 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 CCRL2O00421 344 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 CPEP16870 476 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 TTKP33981 857 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 SERPINF1P36955 418 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 KIR3DL2P43630 455 aa17.11■□□□□ 0.33
TRAPPC12-220ENST00000482645 ALKBH1Q13686 389 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms