RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 NUDT15Q9NV35 164 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 PAIP2BQ9ULR5 123 aaKnown RBP13.87□□□□□ -0.19
RXRA-202ENST00000481739 FRYQ5TBA9 3013 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 H7C417 338 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 LDLRAD4O15165 306 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 CEACAM4O75871 244 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 CST2P09228 141 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 PRKXP51817 358 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 RRAS2P62070 204 aaPredicted RBP13.87□□□□□ -0.19
RXRA-202ENST00000481739 SPOCK1Q08629 439 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 CBX3Q13185 183 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 BCL2A1Q16548 175 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 ZFP69Q49AA0 526 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 PHYHD1Q5SRE7 291 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 GLCCI1Q86VQ1 547 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 TCTE3Q8IZS6 198 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR51A2Q8NGJ7 313 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR1J2Q8NGS2 313 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR51E1Q8TCB6 317 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 SPTSSAQ969W0 71 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 C10orf35Q96D05 121 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 SCMH1Q96GD3 660 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 SLCO5A1Q9H2Y9 848 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 SCPEP1Q9HB40 452 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 ING3Q9NXR8 418 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 FBLN5Q9UBX5 448 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 MTFP1Q9UDX5 166 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 CSAG2Q9Y5P2 127 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 IGKV3D-15A0A087WSY6 115 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 CIB4A0PJX0 185 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 OR6C65A6NJZ3 312 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 RBBP9O75884 186 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 BPNT1O95861 308 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 CSF1P09603 554 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 GIFP27352 417 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 MAGEA5P43359 124 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 PPIAP62937 165 aaKnown RBP13.86□□□□□ -0.19
RXRA-202ENST00000481739 SCRN3Q0VDG4 424 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 FAM189A2Q15884 450 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 RNASE12Q5GAN4 147 aaKnown RBP13.86□□□□□ -0.19
RXRA-202ENST00000481739 IGFL2Q6UWQ7 119 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 MEIOBQ8N635 442 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 HRASLSQ9HDD0 168 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 SLC5A6Q9Y289 635 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 CFAP47Q6ZTR5 3102 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 KIAA1549Q9HCM3 1950 aa13.86□□□□□ -0.19
RXRA-202ENST00000481739 METTL21EPA6NDL7 271 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 PRAF2O60831 178 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 IGLV3-1P01715 115 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 CLDN15P56746 228 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 ACTBP60709 375 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 ACTG1P63261 375 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 RAB35Q15286 201 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 COMMD2Q86X83 199 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 TMEM251Q8N6I4 163 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 ADAT3Q96EY9 351 aaPredicted RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 NUDT16L1Q9BRJ7 211 aaKnown RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 ATG5Q9H1Y0 275 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 NEK6Q9HC98 313 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 GPR84Q9NQS5 396 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 TMEM38BQ9NVV0 291 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 ZNF107Q9UII5 783 aaPredicted RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 RAB22AQ9UL26 194 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 URB1O60287 2271 aaKnown RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 ALDOBP05062 364 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 CELA3AP09093 270 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 PRSS3P35030 304 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 STARP49675 285 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 LHX2P50458 406 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 EFNB2P52799 333 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 PCBD1P61457 104 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 Q6ZSR3 168 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 ZADH2Q8N4Q0 377 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 OR52H1Q8NGJ2 320 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 PGAM5Q96HS1 289 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 PARPBPQ9NWS1 579 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 KLK11Q9UBX7 282 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 TNRC6AQ8NDV7 1962 aaKnown RBP13.85□□□□□ -0.19
RXRA-202ENST00000481739 LOC400499M0QZD8 3231 aa13.85□□□□□ -0.19
RXRA-202ENST00000481739 TRAV17A0A0B4J275 112 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 MTRF1O75570 445 aaKnown RBP13.84□□□□□ -0.19
RXRA-202ENST00000481739 ALX3O95076 343 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 MT-ND4P03905 459 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 H2AFB2P0C5Z0 115 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 TMIGD3P0DMS9 266 aaPredicted RBP13.84□□□□□ -0.19
RXRA-202ENST00000481739 ZNF708P17019 499 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 PSMB1P20618 241 aaKnown RBP13.84□□□□□ -0.19
RXRA-202ENST00000481739 GSK3AP49840 483 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 KCNJ8Q15842 424 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 CCDC92Q53HC0 331 aaPredicted RBP13.84□□□□□ -0.19
RXRA-202ENST00000481739 FAM57BQ71RH2 274 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 ZFP62Q8NB50 900 aaPredicted RBP13.84□□□□□ -0.19
RXRA-202ENST00000481739 ROBO4Q8WZ75 1007 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 LINC00470Q9BZP3 86 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 RNF122Q9H9V4 155 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 CRLF2Q9HC73 371 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 PLEK2Q9NYT0 353 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 DKK4Q9UBT3 224 aa13.84□□□□□ -0.19
RXRA-202ENST00000481739 MCTS1Q9ULC4 181 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms