RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
UPF3A-206ENST00000480362 RNASE6Q93091 150 aaKnown RBP15.23■□□□□ 0.03
UPF3A-206ENST00000480362 SGK3Q96BR1 496 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 LRRC46Q96FV0 321 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 OR14A2Q96R54 314 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 CDH20Q9HBT6 801 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 MOV10Q9HCE1 1003 aaKnown RBP15.23■□□□□ 0.03
UPF3A-206ENST00000480362 HHLA2Q9UM44 414 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 GSTK1Q9Y2Q3 226 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 IGHV1-18A0A0C4DH31 117 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 A0A0U1RQV5 110 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 A0A1B0GVI7 797 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 A0A1W2PPK0 400 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 ZNF879B4DU55 563 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 ZG16O60844 167 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 CECR9P0C854 216 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 OCM2P0CE71 109 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 SOX2P48431 317 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 SPCS2Q15005 226 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 Q499Y3 187 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 PAMR1Q6UXH9 720 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 COLCA1Q6ZS62 124 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 COMMD2Q86X83 199 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 TSEN15Q8WW01 171 aaKnown RBP15.22■□□□□ 0.03
UPF3A-206ENST00000480362 APOBEC3DQ96AK3 386 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-206ENST00000480362 LYZL4Q96KX0 146 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 GPR84Q9NQS5 396 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 NPAP1Q9NZP6 1156 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 DHDHQ9UQ10 334 aa15.22■□□□□ 0.03
UPF3A-206ENST00000480362 RP1L1Q8IWN7 2480 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-206ENST00000480362 IGSF10Q6WRI0 2623 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 M0R1B8 84 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 SLC22A1O15245 554 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 SYT7O43581 403 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 IGLV3-1P01715 115 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 PPP3CBP16298 524 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 WNT5AP41221 380 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 C3orf36Q3SXR2 165 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 GLYATL3Q5SZD4 288 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 FAM27D1Q5T7N8 215 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 XKRXQ6PP77 449 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 OR13C3Q8NGS6 347 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 ITLN2Q8WWU7 325 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-206ENST00000480362 ZC3HAV1LQ96H79 300 aaKnown RBP15.21■□□□□ 0.03
UPF3A-206ENST00000480362 FAM71F1Q96KD3 344 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-206ENST00000480362 KCTD7Q96MP8 289 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 DERL3Q96Q80 235 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 KCNS3Q9BQ31 491 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 SOX7Q9BT81 388 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 PPIL3Q9H2H8 161 aaKnown RBP15.21■□□□□ 0.03
UPF3A-206ENST00000480362 EIF3KQ9UBQ5 218 aaKnown RBP15.21■□□□□ 0.03
UPF3A-206ENST00000480362 STARD10Q9Y365 291 aa15.21■□□□□ 0.03
UPF3A-206ENST00000480362 PIN1P1O15428 100 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 NGFP01138 241 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 UCHL1P09936 223 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 AGAP20933 346 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 CCL1P22362 96 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 SERPINB10P48595 397 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 CNPY1Q3B7I2 92 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 DOK3Q7L591 496 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 WFDC8Q8IUA0 241 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 ZNF101Q8IZC7 436 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 OR2AE1Q8NHA4 323 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 NDNFQ8TB73 568 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 ORAI1Q96D31 301 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 REEP6Q96HR9 211 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 NOX4Q9NPH5 578 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 TBCCD1Q9NVR7 557 aa15.2■□□□□ 0.02
UPF3A-206ENST00000480362 TRBV5-7A0A0A0MS05 114 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 A0A1W2PPW3 197 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 TRIM64BA6NI03 449 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 XRCC2O43543 280 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 LMX1BO60663 402 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 CLDN14O95500 239 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 THBDP07204 575 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 ZNF35P13682 527 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 MAPK3P27361 379 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-206ENST00000480362 GRNP28799 593 aaKnown RBP15.19■□□□□ 0.02
UPF3A-206ENST00000480362 SEZ6L2Q6UXD5 910 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 USP43Q70EL4 1123 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 SSX8Q7RTT4 187 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 ZNF808Q8N4W9 903 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-206ENST00000480362 PLPP7Q8NBV4 271 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 KBTBD8Q8NFY9 601 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 OR14K1Q8NGZ2 314 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 THRSPQ92748 146 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 TMEM106AQ96A25 262 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 DCSTAMPQ9H295 470 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 OR51B6Q9H340 312 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 RGCCQ9H4X1 137 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 PTTG3PQ9NZH4 202 aa15.19■□□□□ 0.02
UPF3A-206ENST00000480362 IGHV2OR16-5A0A0B4J2B6 119 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 ICMTO60725 284 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 ARL6IP5O75915 188 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 CDRT1O95170 752 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 CD2P06729 351 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 FAM157BP0CG42 384 aa15.18■□□□□ 0.02
UPF3A-206ENST00000480362 ZNF12P17014 697 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms