RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MRM2Q9UI43 246 aaKnown RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 ARID1AO14497 2285 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 OTOGQ6ZRI0 2925 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 PLSCR5A0PG75 271 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 IRGMA1A4Y4 181 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 PSMD9O00233 223 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 TIMM8AO60220 97 aaPredicted RBP16.86■□□□□ 0.29
LIME1-205ENST00000480139 KRT8P05787 483 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 ANOS1P23352 680 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 EFNA4P52798 201 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 ZNF85Q03923 595 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 HLXQ14774 488 aaPredicted RBP16.86■□□□□ 0.29
LIME1-205ENST00000480139 GLYATL3Q5SZD4 288 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 SHEQ5VZ18 495 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 PLEKHG7Q6ZR37 379 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 FAM57BQ71RH2 274 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 PGAP1Q75T13 922 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 SORCS2Q96PQ0 1159 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 VRK1Q99986 396 aaPredicted RBP16.86■□□□□ 0.29
LIME1-205ENST00000480139 REPIN1Q9BWE0 567 aaKnown RBP16.86■□□□□ 0.29
LIME1-205ENST00000480139 ANKRD60Q9BZ19 345 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 OR10A2Q9H208 303 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 MOB1AQ9H8S9 216 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 FGF20Q9NP95 211 aaPredicted RBP16.86■□□□□ 0.29
LIME1-205ENST00000480139 ZNF391Q9UJN7 358 aa16.86■□□□□ 0.29
LIME1-205ENST00000480139 TMEM269A0A1B0GVZ9 245 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 DAPL1A0PJW8 107 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 METTL15A6NJ78 407 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 C17orf100A8MU93 164 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 IQCF6A8MYZ5 107 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 SRSF10O75494 262 aaKnown RBP16.85■□□□□ 0.29
LIME1-205ENST00000480139 F12P00748 615 aaPredicted RBP16.85■□□□□ 0.29
LIME1-205ENST00000480139 ADH4P08319 380 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 CFL1P23528 166 aaKnown RBP16.85■□□□□ 0.29
LIME1-205ENST00000480139 ZNF92Q03936 586 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 PCGF3Q3KNV8 242 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 MRPL21Q7Z2W9 205 aaKnown RBP16.85■□□□□ 0.29
LIME1-205ENST00000480139 KCTD20Q7Z5Y7 419 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 NEU4Q8WWR8 484 aaPredicted RBP16.85■□□□□ 0.29
LIME1-205ENST00000480139 PGAM5Q96HS1 289 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 PLCXD1Q9NUJ7 323 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 NKIRAS2Q9NYR9 191 aa16.85■□□□□ 0.29
LIME1-205ENST00000480139 C5orf63A6NC05 138 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 TBX1O43435 398 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 NDUFS7O75251 213 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 NAT2P11245 290 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 MYF6P23409 242 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ZNF81P51508 661 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ACTA2P62736 377 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ACTG2P63267 376 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 TIGD6Q17RP2 521 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ALKBH6Q3KRA9 238 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 CDONQ4KMG0 1287 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 OR2T2Q6IF00 324 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 LAIR2Q6ISS4 152 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 KRTAP1-3Q8IUG1 177 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 OR52I1Q8NGK6 324 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 OR2AE1Q8NHA4 323 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ITFG2Q969R8 447 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 MRPL48Q96GC5 212 aaKnown RBP16.84■□□□□ 0.29
LIME1-205ENST00000480139 DIRC2Q96SL1 478 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ZNF319Q9P2F9 582 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 NUFIP1Q9UHK0 495 aaKnown RBP16.84■□□□□ 0.29
LIME1-205ENST00000480139 ITGB1BP2Q9UKP3 347 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 ZDHHC8Q9ULC8 765 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 RAB26Q9ULW5 256 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 MYRFQ9Y2G1 1151 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 R4GMQ9 66 aa16.84■□□□□ 0.29
LIME1-205ENST00000480139 A0A0U1RQV5 110 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 A0A1B0GWJ7 208 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 MAGEB4O15481 346 aaPredicted RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 PIPP12273 146 aaPredicted RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 CHD3Q12873 2000 aaKnown RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 GALEQ14376 348 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 FAM209AQ5JX71 171 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 Q5PR19 223 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 LIPNQ5VXI9 398 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 FAM220AQ7Z4H9 259 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 ZCCHC24Q8N2G6 241 aaKnown RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 YIPF7Q8N8F6 280 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 OR8G5Q8NG78 346 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 OR8B12Q8NGG6 310 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 SGK3Q96BR1 496 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 REEP6Q96HR9 211 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 MYOZ1Q9NP98 299 aaPredicted RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 BRD7Q9NPI1 651 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 CNOT2Q9NZN8 540 aaKnown RBP16.83■□□□□ 0.28
LIME1-205ENST00000480139 N6AMT1Q9Y5N5 214 aa16.83■□□□□ 0.28
LIME1-205ENST00000480139 hCG_38984A0A1B0GV85 526 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 ZSCAN5BA6NJL1 495 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 LOC110117498-PIK3R3F6TDL0 507 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 FAM20BO75063 409 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 TACSTD2P09758 323 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 DCKP27707 260 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 DDOSTP39656 456 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 CSNK2BP67870 215 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 MFGE8Q08431 387 aaPredicted RBP16.82■□□□□ 0.28
LIME1-205ENST00000480139 SPNS3Q6ZMD2 512 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms